Sample	total_reads	paired_total	paired_aligned_none	paired_aligned_one	paired_aligned_multi	paired_aligned_discord_one	paired_aligned_mate_none	paired_aligned_mate_one	paired_aligned_mate_multi	overall_alignment_rate	paired_aligned_mate_multi_halved	paired_aligned_mate_none_halved	paired_aligned_mate_one_halved
G218M09_CKDL230039433-1A_HHVHMDSX7_L3_R1	24242449	24242449	4889115	14781747	4571587	2606481	2117560	981851	1465857	95.63	732928.5	1058780.0	490925.5
G218M10_CKDL230039433-1A_HHVHMDSX7_L3_R1	20061760	20061760	3878696	12331108	3851956	1973347	1930734	768027	1111937	95.19	555968.5	965367.0	384013.5
G218M11_CKDL230039433-1A_HHVHMDSX7_L3_R1	15533120	15533120	4625871	4594397	6312852	1709426	2420468	1471844	1940578	92.21	970289.0	1210234.0	735922.0
G218M12_CKDL230039433-1A_HHVHMDSX7_L3_R1	15767218	15767218	4892458	4024360	6850400	1765964	2559048	1627945	2065995	91.88	1032997.5	1279524.0	813972.5
README_Bowtie2.sh	250000	250000								95.16