[2023-10-18 15:53:32,721] multiqc [DEBUG ] This is MultiQC v1.12 [2023-10-18 15:53:32,721] multiqc [DEBUG ] No MultiQC config found: /usr/lib/python3.8/site-packages/multiqc_config.yaml [2023-10-18 15:53:32,721] multiqc [DEBUG ] No MultiQC config found: /usr2/collab/mpyatkov/.multiqc_config.yaml [2023-10-18 15:53:32,722] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2023-10-18 15:53:32,722] multiqc [DEBUG ] Command used: /usr/bin/multiqc /projectnb/wax-dk/max/G215_k4me1_k27ac_k9ac/ -o Job_Summary/G215_k4me1_k27ac_k9ac_MULTIQC [2023-10-18 15:53:33,048] multiqc [WARNING] MultiQC Version v1.16 now available! [2023-10-18 15:53:33,048] multiqc [DEBUG ] Command : /usr/bin/multiqc /projectnb/wax-dk/max/G215_k4me1_k27ac_k9ac/ -o Job_Summary/G215_k4me1_k27ac_k9ac_MULTIQC [2023-10-18 15:53:33,048] multiqc [DEBUG ] Working dir : /projectnb/wax-dk/max/G215_k4me1_k27ac_k9ac/Scripts/16_MULTIQC [2023-10-18 15:53:33,048] multiqc [DEBUG ] Template : default [2023-10-18 15:53:33,048] multiqc [DEBUG ] Running Python 3.8.1 (default, Dec 26 2019, 14:42:08) [GCC 9.2.0] [2023-10-18 15:53:33,050] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, pbmarkdup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, odgi, pangolin, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pychopper, pycoqc, minionqc, multivcfanalyzer, clusterflow, checkqc, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype, whatshap [2023-10-18 15:53:33,050] multiqc [DEBUG ] Using temporary directory for creating report: /scratch/tmpcjq796bu [2023-10-18 15:53:33,191] multiqc [INFO ] Search path : /projectnb/wax-dk/max/G215_k4me1_k27ac_k9ac [2023-10-18 15:53:34,550] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2023-10-18 15:53:34,555] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2023-10-18 15:53:34,556] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2023-10-18 15:53:34,563] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2023-10-18 15:53:34,577] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2023-10-18 15:53:34,584] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: copy_from_indexfile.py [2023-10-18 15:53:34,586] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: copy_from_indexfile.py [2023-10-18 15:53:34,618] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: copy_samples.py [2023-10-18 15:53:34,620] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: copy_samples.py [2023-10-18 15:53:34,620] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: copy_samples.py [2023-10-18 15:53:34,624] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: copy_samples.py [2023-10-18 15:53:34,636] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: copy_samples.py [2023-10-18 15:53:34,698] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2023-10-18 15:53:34,709] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2023-10-18 15:53:34,709] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2023-10-18 15:53:34,717] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2023-10-18 15:53:34,731] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2023-10-18 15:53:34,753] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2023-10-18 15:53:34,757] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2023-10-18 15:53:34,758] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2023-10-18 15:53:34,764] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2023-10-18 15:53:34,764] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2023-10-18 15:53:34,771] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2023-10-18 15:53:34,772] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: DNAChIPseq_pipeline.pdf [2023-10-18 15:53:34,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:53:34,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:53:34,802] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_sorted_mapped.bam.bai [2023-10-18 15:53:34,802] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_alignments.bam [2023-10-18 15:53:34,802] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_sorted_mapped.bam [2023-10-18 15:53:34,803] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_alignments.bam.bai [2023-10-18 15:53:34,859] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,863] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,864] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,870] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,870] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,870] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,870] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,871] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,871] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,871] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,871] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:34,894] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:35,998] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:53:36,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_filtered_StrgtPks.bam [2023-10-18 15:53:36,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:53:36,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_StrgtPksRm_tab.bed [2023-10-18 15:53:36,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_StrgtPks_tab.bed [2023-10-18 15:53:36,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_filtered_StrgtPks.bam.bai [2023-10-18 15:53:36,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_filtered_StrgtPks_sorted.bam [2023-10-18 15:53:36,085] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_metrics [2023-10-18 15:53:36,089] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_metrics [2023-10-18 15:53:36,090] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_metrics [2023-10-18 15:53:36,096] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_metrics [2023-10-18 15:53:36,118] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_metrics [2023-10-18 15:53:36,119] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_hist.pdf [2023-10-18 15:53:36,133] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:36,135] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:36,135] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:36,140] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:36,140] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:36,148] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:36,178] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,182] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,183] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,188] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,188] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,188] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,188] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,189] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,189] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,189] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,198] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,654] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_read_SICER.out1 [2023-10-18 15:53:36,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:53:36,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-1-removed.bed [2023-10-18 15:53:36,709] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:53:36,729] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,733] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,734] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,740] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,740] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,740] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,740] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,740] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,740] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:36,740] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:37,212] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12-W400-G2400-E100.scoreisland [2023-10-18 15:53:37,235] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:53:37,235] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:53:37,260] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:37,264] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:37,278] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:53:37,278] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:53:37,279] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:53:37,279] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:53:37,307] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,311] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,312] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,317] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,317] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,317] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,317] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,317] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,317] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,318] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,318] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:37,335] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:38,146] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:38,222] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:53:38,247] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,252] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,252] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,257] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,257] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,258] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,258] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,258] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,258] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,258] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,258] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,266] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,605] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_read_MACS2_peaks.out1 [2023-10-18 15:53:38,654] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:53:38,677] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,681] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,682] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,688] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:38,696] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:39,023] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:39,067] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,071] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,072] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,077] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,077] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,077] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,078] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,078] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,078] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,078] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,078] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,093] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,816] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:39,876] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:39,878] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:39,879] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:39,884] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:39,884] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:39,891] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:39,928] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:39,932] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:39,932] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:39,938] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:39,938] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:39,945] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:39,946] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_summits.bed [2023-10-18 15:53:39,946] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:53:39,947] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:53:39,947] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:53:39,947] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:53:39,953] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:39,956] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:39,969] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:53:39,970] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:53:39,973] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:53:39,976] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:53:40,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_alignments.bam.bai [2023-10-18 15:53:40,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_sorted_mapped.bam [2023-10-18 15:53:40,005] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_sorted_mapped.bam.bai [2023-10-18 15:53:40,006] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_alignments.bam [2023-10-18 15:53:40,035] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:40,039] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:40,040] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:40,045] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:40,045] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:40,115] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:40,147] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_read_MACS2_peaks.out1 [2023-10-18 15:53:40,152] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_read_MACS2_peaks.out1 [2023-10-18 15:53:40,152] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_read_MACS2_peaks.out1 [2023-10-18 15:53:40,157] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_read_MACS2_peaks.out1 [2023-10-18 15:53:40,158] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_read_MACS2_peaks.out1 [2023-10-18 15:53:40,224] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_read_MACS2_peaks.out1 [2023-10-18 15:53:40,248] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:40,250] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:40,251] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:40,255] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:40,256] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:40,262] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:40,264] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_summits.bed [2023-10-18 15:53:40,264] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:53:40,265] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:53:40,311] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,316] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,316] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,322] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,322] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,322] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,322] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,322] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,322] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,323] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,323] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,330] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,681] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:40,726] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,730] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,735] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,735] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,736] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,736] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,736] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,736] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,736] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,736] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:40,743] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:41,073] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:41,113] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:41,117] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:41,118] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:41,124] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:41,131] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:41,132] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:53:41,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:41,140] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:41,152] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:53:41,152] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:53:41,153] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:53:41,153] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:53:41,154] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:53:41,191] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,195] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,195] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,201] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,201] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,201] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,201] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,201] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,201] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,201] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,202] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:41,223] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:42,332] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:53:42,393] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_StrgtPksRm_tab.bed [2023-10-18 15:53:42,394] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_StrgtPks_tab.bed [2023-10-18 15:53:42,394] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_filtered_StrgtPks.bam.bai [2023-10-18 15:53:42,395] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_filtered_StrgtPks.bam [2023-10-18 15:53:42,395] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_filtered_StrgtPks_sorted.bam [2023-10-18 15:53:42,396] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:53:42,415] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:42,419] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:42,420] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:42,427] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:42,427] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:42,440] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:42,460] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_read_SICER.out1 [2023-10-18 15:53:42,464] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_read_SICER.out1 [2023-10-18 15:53:42,465] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_read_SICER.out1 [2023-10-18 15:53:42,470] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_read_SICER.out1 [2023-10-18 15:53:42,470] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_read_SICER.out1 [2023-10-18 15:53:42,648] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_read_SICER.out1 [2023-10-18 15:53:42,690] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,694] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,695] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,701] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:42,817] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:48,094] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:48,418] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:53:48,446] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland [2023-10-18 15:53:48,450] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland [2023-10-18 15:53:48,451] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland [2023-10-18 15:53:48,456] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland [2023-10-18 15:53:48,457] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland [2023-10-18 15:53:48,619] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9-W400-G2400-E100.scoreisland [2023-10-18 15:53:48,628] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:53:48,629] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-1-removed.bed [2023-10-18 15:53:48,655] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:53:48,655] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:53:48,656] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:53:48,662] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:48,664] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:48,676] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:53:48,677] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:53:48,677] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:53:48,711] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_metrics [2023-10-18 15:53:48,715] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_metrics [2023-10-18 15:53:48,715] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_metrics [2023-10-18 15:53:48,721] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_metrics [2023-10-18 15:53:48,752] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_metrics [2023-10-18 15:53:48,754] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_hist.pdf [2023-10-18 15:53:48,818] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:53:48,821] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:53:48,826] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_sorted_mapped.bam.bai [2023-10-18 15:53:48,863] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_alignments.bam.bai [2023-10-18 15:53:48,863] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_sorted_mapped.bam [2023-10-18 15:53:48,864] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_alignments.bam [2023-10-18 15:53:48,891] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,896] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,896] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,901] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,901] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,902] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,902] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,902] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,902] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,902] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,902] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:48,924] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:50,022] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:53:50,084] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:53:50,093] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:50,095] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:50,096] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:50,100] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:50,100] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:50,107] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:53:50,134] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:50,138] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:50,138] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:50,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:50,152] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:53:50,169] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:50,173] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:50,173] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:50,180] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:50,203] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:53:50,253] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:50,257] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:50,258] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:50,263] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:50,264] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:50,413] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.gappedPeak [2023-10-18 15:53:50,441] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:50,454] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:50,455] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:50,464] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:50,464] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:50,622] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_broad_MACS2_peaks.broadPeak [2023-10-18 15:53:50,629] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_summits.bed [2023-10-18 15:53:50,630] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:53:50,651] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_read_MACS2_peaks.out1 [2023-10-18 15:53:50,655] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_read_MACS2_peaks.out1 [2023-10-18 15:53:50,655] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_read_MACS2_peaks.out1 [2023-10-18 15:53:50,668] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_read_MACS2_peaks.out1 [2023-10-18 15:53:50,690] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_read_MACS2_peaks.out1 [2023-10-18 15:53:50,692] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:53:50,698] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:50,701] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:50,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:53:50,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:53:50,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:53:50,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:53:50,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:53:50,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:53:50,717] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_StrgtPksRm_tab.bed [2023-10-18 15:53:50,718] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_filtered_StrgtPks.bam [2023-10-18 15:53:50,719] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_filtered_StrgtPks.bam.bai [2023-10-18 15:53:50,719] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_filtered_StrgtPks_sorted.bam [2023-10-18 15:53:50,720] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_StrgtPks_tab.bed [2023-10-18 15:53:50,747] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_metrics [2023-10-18 15:53:50,751] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_metrics [2023-10-18 15:53:50,752] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_metrics [2023-10-18 15:53:50,758] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_metrics [2023-10-18 15:53:50,780] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_metrics [2023-10-18 15:53:50,781] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_hist.pdf [2023-10-18 15:53:50,808] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:50,812] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:50,812] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:50,818] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:50,818] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:50,826] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland.bb [2023-10-18 15:53:50,827] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:53:50,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-1-removed.bed [2023-10-18 15:53:50,857] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland [2023-10-18 15:53:50,860] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland [2023-10-18 15:53:50,860] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland [2023-10-18 15:53:50,866] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland [2023-10-18 15:53:50,866] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland [2023-10-18 15:53:51,132] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100.scoreisland [2023-10-18 15:53:51,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:53:51,208] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,212] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,212] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:51,224] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:58,114] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:53:58,542] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,544] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,545] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,549] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,550] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,550] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,550] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,550] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,550] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,550] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,820] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_read_SICER.out1 [2023-10-18 15:53:58,859] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:53:58,860] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:53:58,874] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:58,879] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:53:58,895] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:53:58,896] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:53:58,896] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:53:58,897] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:53:58,910] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: process_output_extradetailed.R [2023-10-18 15:53:58,914] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: process_output_extradetailed.R [2023-10-18 15:53:58,915] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: process_output_extradetailed.R [2023-10-18 15:53:58,923] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: process_output_extradetailed.R [2023-10-18 15:53:58,935] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: process_output_extradetailed.R [2023-10-18 15:53:58,942] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: run.sh [2023-10-18 15:53:58,944] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: run.sh [2023-10-18 15:53:58,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: run.sh [2023-10-18 15:53:58,962] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: process_output_compact.R [2023-10-18 15:53:58,964] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: process_output_compact.R [2023-10-18 15:53:58,986] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: process_output_detailed.R [2023-10-18 15:53:58,988] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: process_output_detailed.R [2023-10-18 15:53:58,992] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: process_output_detailed.R [2023-10-18 15:53:59,008] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:53:59,011] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:53:59,011] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_alignments.bam.bai [2023-10-18 15:53:59,012] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_sorted_mapped.bam.bai [2023-10-18 15:53:59,012] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_alignments.bam [2023-10-18 15:53:59,039] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_sorted_mapped.bam [2023-10-18 15:53:59,083] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,088] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,088] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,096] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:53:59,120] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:54:00,242] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:54:00,304] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_StrgtPksRm_tab.bed [2023-10-18 15:54:00,304] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:54:00,305] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_StrgtPks_tab.bed [2023-10-18 15:54:00,305] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_filtered_StrgtPks.bam.bai [2023-10-18 15:54:00,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_filtered_StrgtPks_sorted.bam [2023-10-18 15:54:00,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_filtered_StrgtPks.bam [2023-10-18 15:54:00,365] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,369] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,370] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,375] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,375] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,375] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,375] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,375] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,375] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,375] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,771] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_read_SICER.out1 [2023-10-18 15:54:00,833] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,837] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,838] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,844] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,844] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,844] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,844] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,845] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,845] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,845] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,845] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,845] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:00,845] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:10,703] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:11,338] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,343] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,343] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,350] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,351] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,351] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,351] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,351] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,351] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,351] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,704] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland [2023-10-18 15:54:11,724] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-1-removed.bed [2023-10-18 15:54:11,725] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:54:11,725] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:54:11,749] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:11,753] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:11,753] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:11,759] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:11,759] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:11,768] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:11,770] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:54:11,771] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:54:11,771] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:11,777] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:11,780] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:11,793] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:54:11,793] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:11,794] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:54:11,821] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_summits.bed [2023-10-18 15:54:11,850] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:11,854] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:11,854] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:11,861] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:11,861] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:11,942] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:11,976] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:11,979] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:11,979] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:11,986] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:11,986] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:12,124] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:12,148] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:12,150] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:12,151] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:12,155] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:12,155] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:12,161] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:12,163] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:54:12,164] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:54:12,194] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,198] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,198] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,204] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,204] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,204] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,205] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,205] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,205] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,205] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,342] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:12,395] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:12,399] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:12,399] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:12,405] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:12,411] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:12,428] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_read_MACS2_peaks.out1 [2023-10-18 15:54:12,430] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_read_MACS2_peaks.out1 [2023-10-18 15:54:12,430] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_read_MACS2_peaks.out1 [2023-10-18 15:54:12,434] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_read_MACS2_peaks.out1 [2023-10-18 15:54:12,435] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_read_MACS2_peaks.out1 [2023-10-18 15:54:12,520] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_read_MACS2_peaks.out1 [2023-10-18 15:54:12,525] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:12,530] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:12,532] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:12,545] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:54:12,545] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:54:12,546] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:12,546] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:54:12,546] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:54:12,548] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_hist.pdf [2023-10-18 15:54:12,566] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_metrics [2023-10-18 15:54:12,570] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_metrics [2023-10-18 15:54:12,570] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_metrics [2023-10-18 15:54:12,576] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_metrics [2023-10-18 15:54:12,591] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_metrics [2023-10-18 15:54:12,612] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:54:12,615] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:54:12,617] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_alignments.bam [2023-10-18 15:54:12,617] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_sorted_mapped.bam [2023-10-18 15:54:12,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_alignments.bam.bai [2023-10-18 15:54:12,621] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_sorted_mapped.bam.bai [2023-10-18 15:54:12,645] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-1-removed.bed [2023-10-18 15:54:12,661] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:12,664] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:12,664] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:12,668] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:12,669] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:12,675] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:12,698] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,702] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,702] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,714] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,714] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,714] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,714] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,714] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,714] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,714] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:12,955] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_read_SICER.out1 [2023-10-18 15:54:13,021] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,025] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,025] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,030] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,030] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,030] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,031] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,031] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,031] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,031] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,031] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,031] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:13,031] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:19,935] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:20,379] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:54:20,380] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:54:20,399] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland [2023-10-18 15:54:20,403] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland [2023-10-18 15:54:20,404] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland [2023-10-18 15:54:20,409] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland [2023-10-18 15:54:20,409] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland [2023-10-18 15:54:20,661] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11-W400-G2400-E100.scoreisland [2023-10-18 15:54:20,674] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:54:20,675] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:20,675] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:54:20,680] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:20,683] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:20,695] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:20,696] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:54:20,697] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:54:20,733] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,738] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,738] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,743] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,744] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,744] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,744] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,744] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,744] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,744] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,744] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:20,767] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:21,912] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:54:21,983] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_filtered_StrgtPks_sorted.bam [2023-10-18 15:54:21,983] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_StrgtPksRm_tab.bed [2023-10-18 15:54:21,984] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_StrgtPks_tab.bed [2023-10-18 15:54:21,984] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:54:21,985] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_filtered_StrgtPks.bam.bai [2023-10-18 15:54:21,985] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_filtered_StrgtPks.bam [2023-10-18 15:54:22,014] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,018] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,019] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,026] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,026] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,026] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,026] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,026] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,026] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,026] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,236] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:22,272] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:22,274] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:22,275] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:22,279] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:22,287] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:22,289] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:54:22,307] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_read_MACS2_peaks.out1 [2023-10-18 15:54:22,310] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_read_MACS2_peaks.out1 [2023-10-18 15:54:22,310] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_read_MACS2_peaks.out1 [2023-10-18 15:54:22,316] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_read_MACS2_peaks.out1 [2023-10-18 15:54:22,316] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_read_MACS2_peaks.out1 [2023-10-18 15:54:22,365] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_read_MACS2_peaks.out1 [2023-10-18 15:54:22,399] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:54:22,421] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:22,425] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:22,426] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:22,431] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:22,431] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:22,438] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:22,460] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:22,462] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:22,463] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:22,468] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:22,468] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:22,527] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:22,562] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,567] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,567] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,573] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,573] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,573] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,574] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,574] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,574] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,574] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,799] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:22,817] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_summits.bed [2023-10-18 15:54:22,818] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:54:22,819] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:22,824] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:22,826] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:22,839] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:54:22,839] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:22,840] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:54:22,841] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:54:22,842] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_hist.pdf [2023-10-18 15:54:22,888] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_metrics [2023-10-18 15:54:22,892] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_metrics [2023-10-18 15:54:22,893] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_metrics [2023-10-18 15:54:22,898] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_metrics [2023-10-18 15:54:22,921] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_metrics [2023-10-18 15:54:22,931] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:54:22,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:54:22,960] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_alignments.bam [2023-10-18 15:54:22,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_sorted_mapped.bam [2023-10-18 15:54:22,963] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_sorted_mapped.bam.bai [2023-10-18 15:54:22,963] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_alignments.bam.bai [2023-10-18 15:54:23,000] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,004] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,004] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,009] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,009] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,010] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,010] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,010] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,010] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,010] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,010] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:23,039] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:24,147] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:54:24,215] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_filtered_StrgtPks.bam [2023-10-18 15:54:24,216] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_filtered_StrgtPks.bam.bai [2023-10-18 15:54:24,216] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_StrgtPksRm_tab.bed [2023-10-18 15:54:24,217] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_StrgtPks_tab.bed [2023-10-18 15:54:24,218] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:54:24,218] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_filtered_StrgtPks_sorted.bam [2023-10-18 15:54:24,220] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_hist.pdf [2023-10-18 15:54:24,246] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_metrics [2023-10-18 15:54:24,249] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_metrics [2023-10-18 15:54:24,250] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_metrics [2023-10-18 15:54:24,257] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_metrics [2023-10-18 15:54:24,272] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_metrics [2023-10-18 15:54:24,294] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,297] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,297] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,305] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,305] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,305] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,305] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,306] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,306] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,306] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,306] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,322] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,741] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:24,801] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,806] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,806] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,814] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,814] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,814] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,814] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,815] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,815] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,815] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,815] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:24,823] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:25,144] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:25,190] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,195] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,196] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,201] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,201] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,201] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,201] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,202] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,202] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,202] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,202] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,219] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,705] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:25,731] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:54:25,760] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,764] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,764] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,770] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,770] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,770] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,770] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,770] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,770] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:25,771] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:26,087] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_read_MACS2_peaks.out1 [2023-10-18 15:54:26,105] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:54:26,142] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:26,146] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:26,147] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:26,152] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:26,152] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:26,159] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:26,185] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:26,189] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:26,189] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:26,195] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:26,195] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:26,202] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:26,203] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_summits.bed [2023-10-18 15:54:26,230] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:26,235] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:26,238] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:26,250] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:54:26,251] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:54:26,251] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:54:26,252] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:26,253] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:54:26,254] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-1-removed.bed [2023-10-18 15:54:26,303] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,308] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,308] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,313] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,313] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:26,314] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:38,044] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:38,757] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:54:38,782] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,787] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,787] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,794] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,795] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,795] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,795] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,795] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,795] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:38,795] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:39,305] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland [2023-10-18 15:54:39,339] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:54:39,361] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:39,364] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:39,365] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:39,369] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:39,370] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:39,376] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:39,443] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,448] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,448] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,454] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,454] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,454] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,455] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,455] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,455] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,455] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,455] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,466] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:39,998] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_read_SICER.out1 [2023-10-18 15:54:40,035] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:54:40,036] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:40,037] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:54:40,042] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:40,045] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:40,058] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:54:40,059] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:40,060] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:54:40,066] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:54:40,069] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:54:40,071] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_sorted_mapped.bam.bai [2023-10-18 15:54:40,075] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_sorted_mapped.bam [2023-10-18 15:54:40,102] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_alignments.bam [2023-10-18 15:54:40,103] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_alignments.bam.bai [2023-10-18 15:54:40,151] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland [2023-10-18 15:54:40,156] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland [2023-10-18 15:54:40,157] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland [2023-10-18 15:54:40,162] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland [2023-10-18 15:54:40,162] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland [2023-10-18 15:54:40,449] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland [2023-10-18 15:54:40,469] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-1-removed.bed [2023-10-18 15:54:40,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:54:40,506] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,510] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,510] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,515] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,515] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,515] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,515] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,515] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,515] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,516] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,516] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,516] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:40,516] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:52,113] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:54:52,825] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:54:52,855] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:52,859] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:52,859] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:52,865] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:52,865] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:52,873] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:52,910] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,915] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,916] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,924] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,924] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,924] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,925] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,925] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,925] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:52,931] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:53,216] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_read_SICER.out1 [2023-10-18 15:54:53,235] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:53,235] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:54:53,242] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:53,245] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:53,260] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:54:53,260] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:54:53,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:53,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:54:53,306] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,310] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,311] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,317] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,317] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,318] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,318] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,318] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,318] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,318] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,318] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:53,341] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:54,453] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:54:54,515] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_filtered_StrgtPks.bam.bai [2023-10-18 15:54:54,515] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_StrgtPks_tab.bed [2023-10-18 15:54:54,516] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_filtered_StrgtPks_sorted.bam [2023-10-18 15:54:54,516] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_filtered_StrgtPks.bam [2023-10-18 15:54:54,517] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:54:54,518] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_StrgtPksRm_tab.bed [2023-10-18 15:54:54,536] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:54,539] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:54,540] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:54,546] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:54,546] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:54,612] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:54,644] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,648] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,648] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,654] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,655] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,655] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,655] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,655] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,655] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,655] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,909] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:54,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:54:54,924] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_summits.bed [2023-10-18 15:54:54,948] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:54,952] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:54,953] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:54,959] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:54,959] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:54,966] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:54,967] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:54:54,995] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:54,999] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:55,000] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:55,011] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:55,019] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:55,048] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,052] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,052] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,058] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,058] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,058] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,058] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,058] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,059] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,059] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,059] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,064] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,324] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_broad_MACS2_peaks.gappedPeak [2023-10-18 15:54:55,389] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_read_MACS2_peaks.out1 [2023-10-18 15:54:55,393] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_read_MACS2_peaks.out1 [2023-10-18 15:54:55,394] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_read_MACS2_peaks.out1 [2023-10-18 15:54:55,399] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_read_MACS2_peaks.out1 [2023-10-18 15:54:55,400] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_read_MACS2_peaks.out1 [2023-10-18 15:54:55,463] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_read_MACS2_peaks.out1 [2023-10-18 15:54:55,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:54:55,469] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:55,469] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:54:55,475] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:55,478] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:55,492] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:54:55,493] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:55,493] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:54:55,519] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_hist.pdf [2023-10-18 15:54:55,544] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_metrics [2023-10-18 15:54:55,548] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_metrics [2023-10-18 15:54:55,549] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_metrics [2023-10-18 15:54:55,561] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_metrics [2023-10-18 15:54:55,577] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_metrics [2023-10-18 15:54:55,585] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:54:55,588] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:54:55,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_alignments.bam.bai [2023-10-18 15:54:55,630] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_alignments.bam [2023-10-18 15:54:55,631] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_sorted_mapped.bam [2023-10-18 15:54:55,632] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_sorted_mapped.bam.bai [2023-10-18 15:54:55,665] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,670] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,671] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,678] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,678] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,678] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,679] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,679] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,679] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,679] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,679] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:55,702] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:56,814] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:54:56,879] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_StrgtPks_tab.bed [2023-10-18 15:54:56,880] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:54:56,880] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_filtered_StrgtPks.bam.bai [2023-10-18 15:54:56,881] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_filtered_StrgtPks.bam [2023-10-18 15:54:56,881] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_StrgtPksRm_tab.bed [2023-10-18 15:54:56,882] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_filtered_StrgtPks_sorted.bam [2023-10-18 15:54:56,883] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:54:56,935] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,940] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,940] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,945] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,945] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,946] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,946] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,946] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,946] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:56,946] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:57,434] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland [2023-10-18 15:54:57,483] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,498] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,499] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,507] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:57,525] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:58,051] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_read_SICER.out1 [2023-10-18 15:54:58,082] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:54:58,105] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:58,109] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:58,110] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:58,121] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:58,122] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:58,129] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13-W400-G2400-E100.scoreisland.bb [2023-10-18 15:54:58,130] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-1-removed.bed [2023-10-18 15:54:58,131] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:54:58,132] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:54:58,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:58,140] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:54:58,157] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:54:58,158] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:54:58,159] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:54:58,159] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:54:58,163] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:54:58,188] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:58,192] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:58,193] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:58,197] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:58,198] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:58,205] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:54:58,268] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,272] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,273] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,278] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,278] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,279] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,279] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,279] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,279] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,279] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,279] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:58,294] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:59,008] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak [2023-10-18 15:54:59,071] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:59,075] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:59,075] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:59,082] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:59,082] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:59,095] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:54:59,128] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,132] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,132] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,138] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,151] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,717] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:54:59,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_summits.bed [2023-10-18 15:54:59,796] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,805] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,806] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,811] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,811] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,811] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,811] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,811] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,811] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,812] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,812] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:54:59,825] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:55:00,366] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_read_MACS2_peaks.out1 [2023-10-18 15:55:00,402] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:55:00,445] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,449] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,449] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,456] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:00,472] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:01,265] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:01,310] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:55:01,310] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:55:01,311] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:55:01,318] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:01,321] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:01,334] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:55:01,335] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:55:01,335] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:55:01,336] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_hist.pdf [2023-10-18 15:55:01,363] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_metrics [2023-10-18 15:55:01,368] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_metrics [2023-10-18 15:55:01,368] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_metrics [2023-10-18 15:55:01,374] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_metrics [2023-10-18 15:55:01,389] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_metrics [2023-10-18 15:55:01,488] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: index [2023-10-18 15:55:01,491] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: index [2023-10-18 15:55:01,492] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: index [2023-10-18 15:55:01,499] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: index [2023-10-18 15:55:01,507] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: index [2023-10-18 15:55:01,611] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: HEAD [2023-10-18 15:55:01,614] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: HEAD [2023-10-18 15:55:01,637] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: master [2023-10-18 15:55:01,641] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: master [2023-10-18 15:55:01,708] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2023-10-18 15:55:01,710] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2023-10-18 15:55:01,715] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2023-10-18 15:55:01,730] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pre-commit.sample [2023-10-18 15:55:01,732] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pre-commit.sample [2023-10-18 15:55:01,759] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: update.sample [2023-10-18 15:55:01,763] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: update.sample [2023-10-18 15:55:01,769] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: update.sample [2023-10-18 15:55:01,812] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pre-push.sample [2023-10-18 15:55:01,817] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pre-push.sample [2023-10-18 15:55:01,893] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pre-rebase.sample [2023-10-18 15:55:01,897] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: pre-rebase.sample [2023-10-18 15:55:01,898] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pre-rebase.sample [2023-10-18 15:55:01,905] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: pre-rebase.sample [2023-10-18 15:55:01,916] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: pre-rebase.sample [2023-10-18 15:55:01,923] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: prepare-commit-msg.sample [2023-10-18 15:55:01,925] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: prepare-commit-msg.sample [2023-10-18 15:55:02,728] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,737] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,787] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,795] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,795] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,795] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,795] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,796] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,796] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,796] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,796] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,796] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,796] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,805] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.pack [2023-10-18 15:55:02,844] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.idx [2023-10-18 15:55:02,848] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.idx [2023-10-18 15:55:02,849] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.idx [2023-10-18 15:55:02,855] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.idx [2023-10-18 15:55:02,863] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: pack-3c1ea8fabc62046adcaa3eed1299bdc2a6c6c2ed.idx [2023-10-18 15:55:02,984] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 32488096b1ef4138e135329cc26f5439be350e [2023-10-18 15:55:02,987] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 32488096b1ef4138e135329cc26f5439be350e [2023-10-18 15:55:02,987] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 32488096b1ef4138e135329cc26f5439be350e [2023-10-18 15:55:02,992] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 32488096b1ef4138e135329cc26f5439be350e [2023-10-18 15:55:03,001] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 32488096b1ef4138e135329cc26f5439be350e [2023-10-18 15:55:03,169] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 00ee32ffc1cb61dc289a8e2644068d4d022f2a [2023-10-18 15:55:03,171] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 00ee32ffc1cb61dc289a8e2644068d4d022f2a [2023-10-18 15:55:03,176] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 00ee32ffc1cb61dc289a8e2644068d4d022f2a [2023-10-18 15:55:03,300] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:55:03,304] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:55:03,305] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_sorted_mapped.bam.bai [2023-10-18 15:55:03,305] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_sorted_mapped.bam [2023-10-18 15:55:03,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_alignments.bam.bai [2023-10-18 15:55:03,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_alignments.bam [2023-10-18 15:55:03,354] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:03,356] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:03,356] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:03,361] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:03,361] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:03,462] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:03,479] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:03,483] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:03,483] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:03,487] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:03,493] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:03,516] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:03,519] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:03,520] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:03,525] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:03,525] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:03,532] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:03,533] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:55:03,558] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,562] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,562] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,568] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,568] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,569] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,569] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,569] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,569] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,569] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,569] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:03,585] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:04,066] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:04,136] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_read_MACS2_peaks.out1 [2023-10-18 15:55:04,141] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_read_MACS2_peaks.out1 [2023-10-18 15:55:04,141] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_read_MACS2_peaks.out1 [2023-10-18 15:55:04,147] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_read_MACS2_peaks.out1 [2023-10-18 15:55:04,148] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_read_MACS2_peaks.out1 [2023-10-18 15:55:04,245] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_read_MACS2_peaks.out1 [2023-10-18 15:55:04,285] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,288] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,289] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,295] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,295] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,296] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,296] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,296] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,296] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,296] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,296] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,305] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,746] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:04,777] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_summits.bed [2023-10-18 15:55:04,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:04,799] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:55:04,804] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:04,806] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:04,820] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:55:04,820] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:55:04,821] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:55:04,822] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:55:04,822] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:55:04,846] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,851] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,857] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,857] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,857] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,857] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,857] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:04,857] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:05,173] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_read_SICER.out1 [2023-10-18 15:55:05,219] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland [2023-10-18 15:55:05,224] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland [2023-10-18 15:55:05,225] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland [2023-10-18 15:55:05,230] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland [2023-10-18 15:55:05,231] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland [2023-10-18 15:55:05,546] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland [2023-10-18 15:55:05,573] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-1-removed.bed [2023-10-18 15:55:05,598] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:55:05,626] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:05,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:05,630] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:05,636] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:05,636] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:05,644] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:05,645] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:55:05,672] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,677] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,677] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,690] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:05,781] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:10,124] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:10,391] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:55:10,391] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:55:10,396] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:10,399] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:10,418] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:55:10,419] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:55:10,419] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:55:10,420] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:55:10,449] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,453] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,454] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,459] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:10,482] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:11,608] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:11,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_StrgtPks_tab.bed [2023-10-18 15:55:11,671] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_StrgtPksRm_tab.bed [2023-10-18 15:55:11,671] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_filtered_StrgtPks_sorted.bam [2023-10-18 15:55:11,672] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_filtered_StrgtPks.bam.bai [2023-10-18 15:55:11,673] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:55:11,673] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_filtered_StrgtPks.bam [2023-10-18 15:55:11,700] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_metrics [2023-10-18 15:55:11,705] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_metrics [2023-10-18 15:55:11,705] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_metrics [2023-10-18 15:55:11,711] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_metrics [2023-10-18 15:55:11,727] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_metrics [2023-10-18 15:55:11,729] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_hist.pdf [2023-10-18 15:55:11,750] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:11,755] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:11,755] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:11,759] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:11,768] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:11,774] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:11,776] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:11,817] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:11,820] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:11,821] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:11,827] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:11,850] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:11,874] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:11,877] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:11,878] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:11,885] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:11,916] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:11,933] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:11,935] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:11,935] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:11,940] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:11,956] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:11,988] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:11,993] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:12,000] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:12,037] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M5.o1963914 [2023-10-18 15:55:12,041] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M5.o1963914 [2023-10-18 15:55:12,041] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M5.o1963914 [2023-10-18 15:55:12,047] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M5.o1963914 [2023-10-18 15:55:12,058] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M5.o1963914 [2023-10-18 15:55:12,064] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_FASTQC.sh [2023-10-18 15:55:12,067] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_FASTQC.sh [2023-10-18 15:55:12,071] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_FASTQC.sh [2023-10-18 15:55:12,105] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M6.o1963915 [2023-10-18 15:55:12,110] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M6.o1963915 [2023-10-18 15:55:12,110] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M6.o1963915 [2023-10-18 15:55:12,122] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M6.o1963915 [2023-10-18 15:55:12,134] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M6.o1963915 [2023-10-18 15:55:12,152] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M7.o1963916 [2023-10-18 15:55:12,154] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M7.o1963916 [2023-10-18 15:55:12,155] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M7.o1963916 [2023-10-18 15:55:12,160] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M7.o1963916 [2023-10-18 15:55:12,171] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M7.o1963916 [2023-10-18 15:55:12,200] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M16.o1963924 [2023-10-18 15:55:12,204] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M16.o1963924 [2023-10-18 15:55:12,205] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M16.o1963924 [2023-10-18 15:55:12,212] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M16.o1963924 [2023-10-18 15:55:12,230] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M16.o1963924 [2023-10-18 15:55:12,254] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M11.o1963920 [2023-10-18 15:55:12,258] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M11.o1963920 [2023-10-18 15:55:12,259] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M11.o1963920 [2023-10-18 15:55:12,264] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M11.o1963920 [2023-10-18 15:55:12,277] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M11.o1963920 [2023-10-18 15:55:12,299] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M8.o1963917 [2023-10-18 15:55:12,302] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M8.o1963917 [2023-10-18 15:55:12,303] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M8.o1963917 [2023-10-18 15:55:12,312] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M8.o1963917 [2023-10-18 15:55:12,327] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M8.o1963917 [2023-10-18 15:55:12,353] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M13.o1963922 [2023-10-18 15:55:12,357] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M13.o1963922 [2023-10-18 15:55:12,358] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M13.o1963922 [2023-10-18 15:55:12,364] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M13.o1963922 [2023-10-18 15:55:12,377] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M13.o1963922 [2023-10-18 15:55:12,401] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M15.o1963923 [2023-10-18 15:55:12,404] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M15.o1963923 [2023-10-18 15:55:12,404] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M15.o1963923 [2023-10-18 15:55:12,411] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M15.o1963923 [2023-10-18 15:55:12,423] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M15.o1963923 [2023-10-18 15:55:12,474] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M9.o1963918 [2023-10-18 15:55:12,478] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M9.o1963918 [2023-10-18 15:55:12,479] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M9.o1963918 [2023-10-18 15:55:12,485] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M9.o1963918 [2023-10-18 15:55:12,497] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M9.o1963918 [2023-10-18 15:55:12,503] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:12,505] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:12,509] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:12,531] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M10.o1963919 [2023-10-18 15:55:12,534] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M10.o1963919 [2023-10-18 15:55:12,534] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M10.o1963919 [2023-10-18 15:55:12,546] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M10.o1963919 [2023-10-18 15:55:12,559] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M10.o1963919 [2023-10-18 15:55:12,582] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:12,586] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:12,586] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:12,593] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:12,605] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:12,622] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: FASTQC.qsub [2023-10-18 15:55:12,624] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: FASTQC.qsub [2023-10-18 15:55:12,624] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: FASTQC.qsub [2023-10-18 15:55:12,628] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: FASTQC.qsub [2023-10-18 15:55:12,649] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: FASTQC.qsub [2023-10-18 15:55:12,672] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M12.o1963921 [2023-10-18 15:55:12,676] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M12.o1963921 [2023-10-18 15:55:12,676] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M12.o1963921 [2023-10-18 15:55:12,682] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M12.o1963921 [2023-10-18 15:55:12,694] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G215_k4me1_k27ac_k9ac_G215M12.o1963921 [2023-10-18 15:55:12,726] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:12,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:12,730] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:12,735] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:12,736] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:12,800] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:12,828] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,831] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,832] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,838] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,838] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,894] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,920] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,923] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,923] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,929] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,929] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:12,979] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,025] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,029] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,029] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,034] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,035] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,085] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,118] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,122] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,184] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,193] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,194] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,240] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,281] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,284] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,291] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,297] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,297] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,350] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,371] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,374] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,374] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,379] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,379] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,429] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,448] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,451] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,451] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,456] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,456] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,498] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,538] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,543] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,544] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,550] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,550] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,593] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,624] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,628] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,628] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,635] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,635] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,677] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,709] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,719] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,719] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,726] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,769] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,797] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,801] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,801] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,808] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,808] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,856] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,874] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,876] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,877] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,881] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,881] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,922] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:13,948] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,951] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,951] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,957] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,957] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:13,999] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,030] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,039] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,039] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,046] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,046] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,088] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,119] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,122] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,123] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,128] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,129] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,179] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,220] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,221] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,227] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,227] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,275] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,301] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,304] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,304] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,310] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,310] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,359] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,396] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,401] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,401] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,407] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,407] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,453] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,476] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,479] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,479] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,484] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,485] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,529] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,557] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,560] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,560] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,565] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,566] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,614] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2_fastqc.html [2023-10-18 15:55:14,635] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,638] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,638] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,644] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,644] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,692] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1_fastqc.html [2023-10-18 15:55:14,725] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:14,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:14,729] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:14,736] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:14,747] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:14,753] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Trim_Galore.txt [2023-10-18 15:55:14,756] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Trim_Galore.txt [2023-10-18 15:55:14,760] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Trim_Galore.txt [2023-10-18 15:55:14,791] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Trim_Galore.qsub [2023-10-18 15:55:14,793] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Trim_Galore.qsub [2023-10-18 15:55:14,794] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Trim_Galore.qsub [2023-10-18 15:55:14,798] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Trim_Galore.qsub [2023-10-18 15:55:14,808] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Trim_Galore.qsub [2023-10-18 15:55:14,815] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:14,818] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:14,822] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:14,837] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:14,839] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:14,844] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:14,926] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:14,928] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:14,929] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:14,934] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:14,943] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:15,029] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_5.o2171599 [2023-10-18 15:55:15,034] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_5.o2171599 [2023-10-18 15:55:15,034] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_5.o2171599 [2023-10-18 15:55:15,041] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_5.o2171599 [2023-10-18 15:55:15,055] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_5.o2171599 [2023-10-18 15:55:15,063] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:15,066] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:15,111] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,116] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,117] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,123] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,147] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,177] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,181] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,181] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,219] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,231] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,233] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,233] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,237] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,253] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,282] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:15,285] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:15,289] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:15,361] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:15,364] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:15,377] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:15,377] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:15,378] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:15,379] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:15,389] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:15,393] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:15,432] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_5_Hotspots_UCSC.bed [2023-10-18 15:55:15,433] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_5.bed [2023-10-18 15:55:15,435] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_5_Hotspots_UCSC.bed [2023-10-18 15:55:15,436] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_5.bed [2023-10-18 15:55:15,512] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:15,516] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:15,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:15,524] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:15,541] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:15,590] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_2.o2004287 [2023-10-18 15:55:15,594] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_2.o2004287 [2023-10-18 15:55:15,595] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_2.o2004287 [2023-10-18 15:55:15,600] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_2.o2004287 [2023-10-18 15:55:15,615] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_2.o2004287 [2023-10-18 15:55:15,655] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:15,657] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:15,700] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,705] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,705] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,711] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,734] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:15,764] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,767] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,768] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,774] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,798] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:15,819] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,823] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,824] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,831] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,853] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:15,908] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:15,912] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:15,912] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:15,919] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:15,919] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:15,987] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:16,020] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:16,024] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:16,025] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:16,031] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:16,031] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:16,095] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:16,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:16,139] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:16,139] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:16,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:16,151] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:16,153] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:16,154] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:16,154] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:16,155] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:16,158] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:16,198] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:16,203] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:16,203] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:16,212] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:16,212] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:16,270] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:16,302] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:16,307] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:16,307] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:16,314] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:16,324] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:16,350] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_FDR_Barchart.pdf [2023-10-18 15:55:16,351] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_Histogram.pdf [2023-10-18 15:55:16,351] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Female_diffReps_2.peak_filtered.bed [2023-10-18 15:55:16,352] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_2.peak_filtered.bed [2023-10-18 15:55:16,358] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_2_annotated.txt [2023-10-18 15:55:16,361] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_2_annotated.txt [2023-10-18 15:55:16,377] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_annotated.txt [2023-10-18 15:55:16,379] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_annotated.txt [2023-10-18 15:55:16,439] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_screenshot.txt [2023-10-18 15:55:16,442] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_screenshot.txt [2023-10-18 15:55:16,454] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_Peaks_UCSC.bed [2023-10-18 15:55:16,455] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_Hotspots_UCSC.bed [2023-10-18 15:55:16,456] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_2.bed [2023-10-18 15:55:16,457] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_600.peak_filtered.bed [2023-10-18 15:55:16,457] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_200.peak_filtered.bed [2023-10-18 15:55:16,500] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_FDR_Barchart.pdf [2023-10-18 15:55:16,500] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_Histogram.pdf [2023-10-18 15:55:16,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_2.bed [2023-10-18 15:55:16,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Female_diffReps_2.bed [2023-10-18 15:55:16,519] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_2_annotated.txt [2023-10-18 15:55:16,522] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_2_annotated.txt [2023-10-18 15:55:16,522] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_2_annotated.txt [2023-10-18 15:55:16,526] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_2_annotated.txt [2023-10-18 15:55:16,534] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_2_annotated.txt [2023-10-18 15:55:16,557] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_annotated.txt [2023-10-18 15:55:16,561] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_annotated.txt [2023-10-18 15:55:16,562] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_annotated.txt [2023-10-18 15:55:16,568] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_annotated.txt [2023-10-18 15:55:16,576] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_annotated.txt [2023-10-18 15:55:16,608] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_screenshot.txt [2023-10-18 15:55:16,610] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_2_screenshot.txt [2023-10-18 15:55:16,623] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_Peaks_UCSC.bed [2023-10-18 15:55:16,623] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_2_Hotspots_UCSC.bed [2023-10-18 15:55:16,624] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_2.bed [2023-10-18 15:55:16,626] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_200.bed [2023-10-18 15:55:16,626] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_600.bed [2023-10-18 15:55:16,672] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:16,675] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:16,675] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:16,680] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:16,691] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:16,698] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M11.o1964055 [2023-10-18 15:55:16,707] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M11.o1964055 [2023-10-18 15:55:16,712] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M11.o1964055 [2023-10-18 15:55:16,736] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M16.o1964059 [2023-10-18 15:55:16,738] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M16.o1964059 [2023-10-18 15:55:16,745] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M16.o1964059 [2023-10-18 15:55:16,766] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M15.o1964058 [2023-10-18 15:55:16,769] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M15.o1964058 [2023-10-18 15:55:16,774] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M15.o1964058 [2023-10-18 15:55:16,792] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M12.o1964056 [2023-10-18 15:55:16,794] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M12.o1964056 [2023-10-18 15:55:16,799] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M12.o1964056 [2023-10-18 15:55:16,824] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M13.o1964057 [2023-10-18 15:55:16,829] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M13.o1964057 [2023-10-18 15:55:16,835] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M13.o1964057 [2023-10-18 15:55:16,851] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M7.o1964051 [2023-10-18 15:55:16,854] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M7.o1964051 [2023-10-18 15:55:16,859] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M7.o1964051 [2023-10-18 15:55:16,875] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M9.o1964053 [2023-10-18 15:55:16,877] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M9.o1964053 [2023-10-18 15:55:16,881] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M9.o1964053 [2023-10-18 15:55:16,899] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M5.o1964049 [2023-10-18 15:55:16,903] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M5.o1964049 [2023-10-18 15:55:16,908] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M5.o1964049 [2023-10-18 15:55:16,946] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Bowtie2.qsub [2023-10-18 15:55:16,950] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Bowtie2.qsub [2023-10-18 15:55:16,950] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Bowtie2.qsub [2023-10-18 15:55:16,955] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Bowtie2.qsub [2023-10-18 15:55:16,974] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Bowtie2.qsub [2023-10-18 15:55:16,980] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M10.o1964054 [2023-10-18 15:55:16,982] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M10.o1964054 [2023-10-18 15:55:16,987] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M10.o1964054 [2023-10-18 15:55:17,015] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Bowtie2.sh [2023-10-18 15:55:17,017] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_Bowtie2.sh [2023-10-18 15:55:17,018] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Bowtie2.sh [2023-10-18 15:55:17,030] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Bowtie2.sh [2023-10-18 15:55:17,041] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_Bowtie2.sh [2023-10-18 15:55:17,047] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M8.o1964052 [2023-10-18 15:55:17,049] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M8.o1964052 [2023-10-18 15:55:17,053] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M8.o1964052 [2023-10-18 15:55:17,067] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:17,070] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:17,075] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:17,104] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,109] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,114] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M6.o1964050 [2023-10-18 15:55:17,139] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M6.o1964050 [2023-10-18 15:55:17,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G215_k4me1_k27ac_k9ac_G215M6.o1964050 [2023-10-18 15:55:17,162] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Bowtie2_Stats.txt [2023-10-18 15:55:17,167] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Bowtie2_Stats.txt [2023-10-18 15:55:17,189] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:17,192] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:17,196] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:17,211] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M12.o1964023 [2023-10-18 15:55:17,214] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M12.o1964023 [2023-10-18 15:55:17,243] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M7.o1964017 [2023-10-18 15:55:17,246] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M7.o1964017 [2023-10-18 15:55:17,264] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M8.o1964019 [2023-10-18 15:55:17,267] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M8.o1964019 [2023-10-18 15:55:17,287] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M5.o1964015 [2023-10-18 15:55:17,290] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M5.o1964015 [2023-10-18 15:55:17,312] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M9.o1964020 [2023-10-18 15:55:17,314] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M9.o1964020 [2023-10-18 15:55:17,347] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M16.o1964026 [2023-10-18 15:55:17,349] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M16.o1964026 [2023-10-18 15:55:17,376] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M13.o1964024 [2023-10-18 15:55:17,378] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M13.o1964024 [2023-10-18 15:55:17,402] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M10.o1964021 [2023-10-18 15:55:17,405] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M10.o1964021 [2023-10-18 15:55:17,428] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M15.o1964025 [2023-10-18 15:55:17,431] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M15.o1964025 [2023-10-18 15:55:17,484] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Read_Length.sh [2023-10-18 15:55:17,487] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Read_Length.sh [2023-10-18 15:55:17,491] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Read_Length.sh [2023-10-18 15:55:17,504] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:17,507] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:17,512] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:17,546] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,550] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,551] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,563] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,576] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:17,596] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Read_Length.qsub [2023-10-18 15:55:17,598] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Read_Length.qsub [2023-10-18 15:55:17,599] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Read_Length.qsub [2023-10-18 15:55:17,604] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Read_Length.qsub [2023-10-18 15:55:17,614] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Read_Length.qsub [2023-10-18 15:55:17,621] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M6.o1964016 [2023-10-18 15:55:17,624] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M6.o1964016 [2023-10-18 15:55:17,650] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M11.o1964022 [2023-10-18 15:55:17,653] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G215_k4me1_k27ac_k9ac_G215M11.o1964022 [2023-10-18 15:55:17,718] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Read_Length_Stats.txt [2023-10-18 15:55:17,721] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Read_Length_Stats.txt [2023-10-18 15:55:17,948] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:17,952] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:17,953] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:17,960] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:17,970] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:17,991] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_4.o2004285 [2023-10-18 15:55:17,993] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_4.o2004285 [2023-10-18 15:55:17,993] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_4.o2004285 [2023-10-18 15:55:17,998] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_4.o2004285 [2023-10-18 15:55:18,012] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_4.o2004285 [2023-10-18 15:55:18,036] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:18,039] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:18,074] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:18,078] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:18,078] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:18,084] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:18,112] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:18,148] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:18,151] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:18,203] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:18,212] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:18,239] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:18,254] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:18,257] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:18,257] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:18,261] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:18,288] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:18,318] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,322] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,322] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,327] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,327] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,328] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,328] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,328] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,328] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,328] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,328] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,339] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,851] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:18,926] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,928] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,929] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,934] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,934] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,935] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,935] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,935] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,935] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,935] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,935] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:18,945] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:19,440] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:19,542] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:19,547] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:19,548] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:19,555] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:19,556] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:19,593] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:19,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:19,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:19,600] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:19,601] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:19,602] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:19,625] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:19,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:19,630] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:19,636] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:19,637] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:19,683] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:19,721] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,726] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,726] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,734] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:19,746] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:20,221] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:20,248] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_Histogram.pdf [2023-10-18 15:55:20,278] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_FDR_Barchart.pdf [2023-10-18 15:55:20,279] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Male_diffReps_4.peak_filtered.bed [2023-10-18 15:55:20,279] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Female_diffReps_4.peak_filtered.bed [2023-10-18 15:55:20,300] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,304] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,304] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,311] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,319] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,326] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,332] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,340] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_Peaks_UCSC.bed [2023-10-18 15:55:20,369] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_Hotspots_UCSC.bed [2023-10-18 15:55:20,398] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_4.bed [2023-10-18 15:55:20,399] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Male_diffReps_Top_200.peak_filtered.bed [2023-10-18 15:55:20,400] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Male_diffReps_Top_600.peak_filtered.bed [2023-10-18 15:55:20,401] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_Histogram.pdf [2023-10-18 15:55:20,426] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_FDR_Barchart.pdf [2023-10-18 15:55:20,427] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Male_diffReps_4.bed [2023-10-18 15:55:20,427] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Female_diffReps_4.bed [2023-10-18 15:55:20,445] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,449] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,449] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,456] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,469] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K27ac_Female_diffReps_4_annotated.txt [2023-10-18 15:55:20,495] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,499] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,499] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,505] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,518] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K27ac_Male_diffReps_4_annotated.txt [2023-10-18 15:55:20,538] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_Peaks_UCSC.bed [2023-10-18 15:55:20,539] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_4_Hotspots_UCSC.bed [2023-10-18 15:55:20,557] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_4.bed [2023-10-18 15:55:20,558] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Male_diffReps_Top_200.bed [2023-10-18 15:55:20,559] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K27ac_Male_diffReps_Top_600.bed [2023-10-18 15:55:20,689] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastq_reads.qsub [2023-10-18 15:55:20,698] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastq_reads.qsub [2023-10-18 15:55:20,714] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2023-10-18 15:55:20,717] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2023-10-18 15:55:20,721] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2023-10-18 15:55:20,790] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:20,795] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:20,795] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:20,809] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:20,822] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:20,865] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_6.o2201511 [2023-10-18 15:55:20,869] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_6.o2201511 [2023-10-18 15:55:20,869] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_6.o2201511 [2023-10-18 15:55:20,876] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_6.o2201511 [2023-10-18 15:55:20,890] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_6.o2201511 [2023-10-18 15:55:20,896] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:20,898] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:20,946] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:20,950] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:20,950] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:20,957] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:20,979] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:21,001] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:21,005] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:21,006] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:21,018] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:21,045] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:21,061] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:21,064] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:21,064] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:21,069] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:21,085] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:21,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:21,141] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:21,141] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:21,147] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:21,148] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:21,232] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male [2023-10-18 15:55:21,280] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.hotspot [2023-10-18 15:55:21,283] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.hotspot [2023-10-18 15:55:21,283] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.hotspot [2023-10-18 15:55:21,290] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.hotspot [2023-10-18 15:55:21,300] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.hotspot [2023-10-18 15:55:21,338] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:21,341] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:21,342] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:21,351] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:21,351] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:21,447] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated [2023-10-18 15:55:21,452] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:21,453] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:21,453] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:21,454] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:21,479] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:21,483] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:21,483] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:21,488] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:21,489] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:21,519] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.peaks [2023-10-18 15:55:21,553] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.nopeaks [2023-10-18 15:55:21,557] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.nopeaks [2023-10-18 15:55:21,557] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.nopeaks [2023-10-18 15:55:21,564] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.nopeaks [2023-10-18 15:55:21,564] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.nopeaks [2023-10-18 15:55:21,629] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K9ac_Female.vs.G215K9ac_Male.annotated.nopeaks [2023-10-18 15:55:21,636] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_Histogram.pdf [2023-10-18 15:55:21,663] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_FDR_Barchart.pdf [2023-10-18 15:55:21,664] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Female_diffReps_6.peak_filtered.bed [2023-10-18 15:55:21,665] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Male_diffReps_6.peak_filtered.bed [2023-10-18 15:55:21,684] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,686] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,687] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,692] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,700] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,713] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,718] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,718] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,744] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_Hotspots_UCSC.bed [2023-10-18 15:55:21,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_Peaks_UCSC.bed [2023-10-18 15:55:21,801] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_6.bed [2023-10-18 15:55:21,801] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Male_diffReps_Top_600.peak_filtered.bed [2023-10-18 15:55:21,802] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Male_diffReps_Top_200.peak_filtered.bed [2023-10-18 15:55:21,805] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_Histogram.pdf [2023-10-18 15:55:21,832] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_FDR_Barchart.pdf [2023-10-18 15:55:21,833] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Male_diffReps_6.bed [2023-10-18 15:55:21,833] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Female_diffReps_6.bed [2023-10-18 15:55:21,849] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,851] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,871] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_annotated.txt [2023-10-18 15:55:21,901] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,906] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,906] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,911] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,932] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K9ac_Male_diffReps_6_annotated.txt [2023-10-18 15:55:21,955] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_Hotspots_UCSC.bed [2023-10-18 15:55:21,956] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_6_Peaks_UCSC.bed [2023-10-18 15:55:21,963] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_screenshot.txt [2023-10-18 15:55:21,966] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K9ac_Female_diffReps_6_screenshot.txt [2023-10-18 15:55:21,985] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_6.bed [2023-10-18 15:55:21,986] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Male_diffReps_Top_200.bed [2023-10-18 15:55:21,986] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K9ac_Male_diffReps_Top_600.bed [2023-10-18 15:55:22,044] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:22,046] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:22,047] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:22,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:22,072] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:22,085] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M10.o1964247 [2023-10-18 15:55:22,087] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M10.o1964247 [2023-10-18 15:55:22,091] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M10.o1964247 [2023-10-18 15:55:22,105] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M6.o1964243 [2023-10-18 15:55:22,108] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M6.o1964243 [2023-10-18 15:55:22,112] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M6.o1964243 [2023-10-18 15:55:22,126] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M12.o1964249 [2023-10-18 15:55:22,128] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M12.o1964249 [2023-10-18 15:55:22,132] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M12.o1964249 [2023-10-18 15:55:22,150] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M5.o1964241 [2023-10-18 15:55:22,153] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M5.o1964241 [2023-10-18 15:55:22,157] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M5.o1964241 [2023-10-18 15:55:22,187] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M11.o1964248 [2023-10-18 15:55:22,189] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M11.o1964248 [2023-10-18 15:55:22,193] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M11.o1964248 [2023-10-18 15:55:22,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M13.o1964250 [2023-10-18 15:55:22,218] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M13.o1964250 [2023-10-18 15:55:22,223] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M13.o1964250 [2023-10-18 15:55:22,254] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M8.o1964245 [2023-10-18 15:55:22,257] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M8.o1964245 [2023-10-18 15:55:22,261] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M8.o1964245 [2023-10-18 15:55:22,283] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M9.o1964246 [2023-10-18 15:55:22,287] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M9.o1964246 [2023-10-18 15:55:22,297] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M9.o1964246 [2023-10-18 15:55:22,335] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BAM_Count.qsub [2023-10-18 15:55:22,339] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: BAM_Count.qsub [2023-10-18 15:55:22,340] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BAM_Count.qsub [2023-10-18 15:55:22,346] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BAM_Count.qsub [2023-10-18 15:55:22,372] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: BAM_Count.qsub [2023-10-18 15:55:22,378] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M16.o1964253 [2023-10-18 15:55:22,380] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M16.o1964253 [2023-10-18 15:55:22,384] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M16.o1964253 [2023-10-18 15:55:22,434] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:22,437] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:22,442] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:22,457] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M15.o1964252 [2023-10-18 15:55:22,461] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M15.o1964252 [2023-10-18 15:55:22,465] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M15.o1964252 [2023-10-18 15:55:22,489] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:22,493] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:22,493] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:22,498] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:22,514] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:22,520] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M7.o1964244 [2023-10-18 15:55:22,522] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M7.o1964244 [2023-10-18 15:55:22,527] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G215_k4me1_k27ac_k9ac_G215M7.o1964244 [2023-10-18 15:55:22,553] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_BAM_Count.sh [2023-10-18 15:55:22,555] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_BAM_Count.sh [2023-10-18 15:55:22,559] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_BAM_Count.sh [2023-10-18 15:55:22,580] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Read_Counts.sh [2023-10-18 15:55:22,584] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Read_Counts.sh [2023-10-18 15:55:22,627] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2023-10-18 15:55:22,631] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2023-10-18 15:55:22,632] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2023-10-18 15:55:22,638] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2023-10-18 15:55:22,650] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2023-10-18 15:55:22,948] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Chr_Read_Counts.pdf [2023-10-18 15:55:23,241] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2023-10-18 15:55:23,252] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2023-10-18 15:55:23,295] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2023-10-18 15:55:23,304] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2023-10-18 15:55:23,324] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2023-10-18 15:55:23,331] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffreps_parser.sh [2023-10-18 15:55:23,334] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffreps_parser.sh [2023-10-18 15:55:23,376] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2023-10-18 15:55:23,380] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2023-10-18 15:55:23,381] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2023-10-18 15:55:23,387] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2023-10-18 15:55:23,406] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2023-10-18 15:55:23,413] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2023-10-18 15:55:23,416] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2023-10-18 15:55:23,416] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2023-10-18 15:55:23,420] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2023-10-18 15:55:23,429] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2023-10-18 15:55:23,500] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Pipeline_Runtime.txt [2023-10-18 15:55:23,503] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Pipeline_Runtime.txt [2023-10-18 15:55:23,504] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Pipeline_Runtime.txt [2023-10-18 15:55:23,510] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Pipeline_Runtime.txt [2023-10-18 15:55:23,520] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Pipeline_Runtime.txt [2023-10-18 15:55:23,574] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:23,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:23,580] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:23,587] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:23,602] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:23,609] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Peak_Union_Count.sh [2023-10-18 15:55:23,612] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Peak_Union_Count.sh [2023-10-18 15:55:23,616] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Peak_Union_Count.sh [2023-10-18 15:55:23,637] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M6.o1973455 [2023-10-18 15:55:23,640] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M6.o1973455 [2023-10-18 15:55:23,646] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M6.o1973455 [2023-10-18 15:55:23,663] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M12.o1973462 [2023-10-18 15:55:23,665] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M12.o1973462 [2023-10-18 15:55:23,675] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M12.o1973462 [2023-10-18 15:55:23,691] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M8.o1973457 [2023-10-18 15:55:23,693] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M8.o1973457 [2023-10-18 15:55:23,698] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M8.o1973457 [2023-10-18 15:55:23,712] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M15.o1973464 [2023-10-18 15:55:23,714] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M15.o1973464 [2023-10-18 15:55:23,718] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M15.o1973464 [2023-10-18 15:55:23,743] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M7.o1973456 [2023-10-18 15:55:23,745] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M7.o1973456 [2023-10-18 15:55:23,750] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M7.o1973456 [2023-10-18 15:55:23,764] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M13.o1973463 [2023-10-18 15:55:23,766] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M13.o1973463 [2023-10-18 15:55:23,778] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M13.o1973463 [2023-10-18 15:55:23,836] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2023-10-18 15:55:23,839] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2023-10-18 15:55:23,839] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2023-10-18 15:55:23,845] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2023-10-18 15:55:23,858] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2023-10-18 15:55:23,865] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:23,867] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:23,871] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:23,901] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M9.o1973458 [2023-10-18 15:55:23,904] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M9.o1973458 [2023-10-18 15:55:23,908] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M9.o1973458 [2023-10-18 15:55:23,924] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:23,926] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:23,931] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:23,946] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M16.o1973465 [2023-10-18 15:55:23,949] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M16.o1973465 [2023-10-18 15:55:23,953] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M16.o1973465 [2023-10-18 15:55:23,974] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M11.o1973461 [2023-10-18 15:55:23,977] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M11.o1973461 [2023-10-18 15:55:23,983] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M11.o1973461 [2023-10-18 15:55:24,003] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M10.o1973460 [2023-10-18 15:55:24,005] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M10.o1973460 [2023-10-18 15:55:24,011] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M10.o1973460 [2023-10-18 15:55:24,024] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M5.o1973454 [2023-10-18 15:55:24,027] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M5.o1973454 [2023-10-18 15:55:24,031] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G215_k4me1_k27ac_k9ac_G215M5.o1973454 [2023-10-18 15:55:24,098] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2023-10-18 15:55:24,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2023-10-18 15:55:24,100] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2023-10-18 15:55:24,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2023-10-18 15:55:24,126] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2023-10-18 15:55:24,208] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,212] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,213] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,219] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:24,242] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:25,339] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:25,444] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,449] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,449] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,454] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,454] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,455] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,455] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,455] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,455] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,455] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,455] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:25,477] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:26,572] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M9_read_Peak_Union.out1 [2023-10-18 15:55:26,668] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,672] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,672] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,677] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,677] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,677] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,678] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,678] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,678] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,678] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,678] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:26,700] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:27,838] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M16_read_Peak_Union.out1 [2023-10-18 15:55:27,934] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,937] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,944] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,951] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,951] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,951] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,951] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,951] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,952] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,952] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,952] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:27,976] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:29,081] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M5_read_Peak_Union.out1 [2023-10-18 15:55:29,196] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,200] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,200] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,206] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,207] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,207] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,207] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,207] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,207] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,207] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,207] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:29,232] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:30,342] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M12_read_Peak_Union.out1 [2023-10-18 15:55:30,456] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,460] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,460] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,465] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,465] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,466] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,466] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,466] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,466] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,466] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,466] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:30,488] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:31,591] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M8_read_Peak_Union.out1 [2023-10-18 15:55:31,687] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,690] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,690] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,695] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,696] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,696] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,696] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,696] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,696] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,696] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,696] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:31,718] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:32,825] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M13_read_Peak_Union.out1 [2023-10-18 15:55:32,920] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,924] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,924] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,936] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,937] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,937] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,937] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,937] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,937] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,937] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:32,961] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:34,058] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:34,157] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,161] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,211] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,227] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,227] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,227] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,227] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,227] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,227] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,227] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,228] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:34,254] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:35,348] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M7_read_Peak_Union.out1 [2023-10-18 15:55:35,435] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,438] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,438] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,443] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,443] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,444] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,444] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,444] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,444] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,444] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,444] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:35,466] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:36,573] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M11_read_Peak_Union.out1 [2023-10-18 15:55:36,665] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,669] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,669] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,675] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,675] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,675] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,675] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,675] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,676] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,676] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,676] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:36,697] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:37,807] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M10_read_Peak_Union.out1 [2023-10-18 15:55:37,869] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:37,884] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:37,887] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:37,887] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:37,892] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:37,902] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:37,960] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M10.o1965993 [2023-10-18 15:55:37,964] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M10.o1965993 [2023-10-18 15:55:37,964] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M10.o1965993 [2023-10-18 15:55:37,971] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M10.o1965993 [2023-10-18 15:55:37,981] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M10.o1965993 [2023-10-18 15:55:37,991] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M15.o1966001 [2023-10-18 15:55:37,993] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M15.o1966001 [2023-10-18 15:55:37,993] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M15.o1966001 [2023-10-18 15:55:37,997] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M15.o1966001 [2023-10-18 15:55:38,006] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M15.o1966001 [2023-10-18 15:55:38,027] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M7.o1965987 [2023-10-18 15:55:38,030] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M7.o1965987 [2023-10-18 15:55:38,030] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M7.o1965987 [2023-10-18 15:55:38,035] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M7.o1965987 [2023-10-18 15:55:38,045] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M7.o1965987 [2023-10-18 15:55:38,072] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M12.o1965997 [2023-10-18 15:55:38,075] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M12.o1965997 [2023-10-18 15:55:38,075] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M12.o1965997 [2023-10-18 15:55:38,081] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M12.o1965997 [2023-10-18 15:55:38,090] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M12.o1965997 [2023-10-18 15:55:38,132] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M5.o1965983 [2023-10-18 15:55:38,137] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M5.o1965983 [2023-10-18 15:55:38,137] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M5.o1965983 [2023-10-18 15:55:38,144] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M5.o1965983 [2023-10-18 15:55:38,154] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M5.o1965983 [2023-10-18 15:55:38,167] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M6.o1965985 [2023-10-18 15:55:38,169] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M6.o1965985 [2023-10-18 15:55:38,169] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M6.o1965985 [2023-10-18 15:55:38,173] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M6.o1965985 [2023-10-18 15:55:38,182] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M6.o1965985 [2023-10-18 15:55:38,197] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M11.o1965995 [2023-10-18 15:55:38,200] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M11.o1965995 [2023-10-18 15:55:38,200] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M11.o1965995 [2023-10-18 15:55:38,204] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M11.o1965995 [2023-10-18 15:55:38,213] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M11.o1965995 [2023-10-18 15:55:38,225] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M8.o1965989 [2023-10-18 15:55:38,233] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M8.o1965989 [2023-10-18 15:55:38,234] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M8.o1965989 [2023-10-18 15:55:38,239] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M8.o1965989 [2023-10-18 15:55:38,248] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M8.o1965989 [2023-10-18 15:55:38,272] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:38,275] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:38,279] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:38,293] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_CollectInsertSizeMetrics.sh [2023-10-18 15:55:38,295] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_CollectInsertSizeMetrics.sh [2023-10-18 15:55:38,299] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_CollectInsertSizeMetrics.sh [2023-10-18 15:55:38,321] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M9.o1965991 [2023-10-18 15:55:38,323] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M9.o1965991 [2023-10-18 15:55:38,323] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M9.o1965991 [2023-10-18 15:55:38,328] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M9.o1965991 [2023-10-18 15:55:38,343] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M9.o1965991 [2023-10-18 15:55:38,383] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2023-10-18 15:55:38,386] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2023-10-18 15:55:38,387] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2023-10-18 15:55:38,394] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2023-10-18 15:55:38,406] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2023-10-18 15:55:38,422] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:38,424] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:38,424] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:38,428] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:38,438] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:38,470] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M16.o1966003 [2023-10-18 15:55:38,473] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M16.o1966003 [2023-10-18 15:55:38,474] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M16.o1966003 [2023-10-18 15:55:38,479] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M16.o1966003 [2023-10-18 15:55:38,488] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M16.o1966003 [2023-10-18 15:55:38,506] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M13.o1965999 [2023-10-18 15:55:38,509] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M13.o1965999 [2023-10-18 15:55:38,509] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M13.o1965999 [2023-10-18 15:55:38,514] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M13.o1965999 [2023-10-18 15:55:38,523] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G215_k4me1_k27ac_k9ac_G215M13.o1965999 [2023-10-18 15:55:38,543] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: CollectInsertSizeMetrics_Plots.pdf [2023-10-18 15:55:38,571] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:38,574] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:38,574] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:38,579] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:38,589] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:38,625] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M7.o1964767 [2023-10-18 15:55:38,627] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M7.o1964767 [2023-10-18 15:55:38,628] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M7.o1964767 [2023-10-18 15:55:38,633] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M7.o1964767 [2023-10-18 15:55:38,649] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M7.o1964767 [2023-10-18 15:55:38,698] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M5.o1964765 [2023-10-18 15:55:38,701] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M5.o1964765 [2023-10-18 15:55:38,701] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M5.o1964765 [2023-10-18 15:55:38,707] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M5.o1964765 [2023-10-18 15:55:38,716] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M5.o1964765 [2023-10-18 15:55:38,806] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M11.o1964771 [2023-10-18 15:55:38,810] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M11.o1964771 [2023-10-18 15:55:38,810] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M11.o1964771 [2023-10-18 15:55:38,816] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M11.o1964771 [2023-10-18 15:55:38,827] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M11.o1964771 [2023-10-18 15:55:38,877] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M15.o1964774 [2023-10-18 15:55:38,879] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M15.o1964774 [2023-10-18 15:55:38,880] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M15.o1964774 [2023-10-18 15:55:38,885] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M15.o1964774 [2023-10-18 15:55:38,895] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M15.o1964774 [2023-10-18 15:55:38,940] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M12.o1964772 [2023-10-18 15:55:38,943] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M12.o1964772 [2023-10-18 15:55:38,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M12.o1964772 [2023-10-18 15:55:38,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M12.o1964772 [2023-10-18 15:55:38,958] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M12.o1964772 [2023-10-18 15:55:39,002] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M6.o1964766 [2023-10-18 15:55:39,005] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M6.o1964766 [2023-10-18 15:55:39,005] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M6.o1964766 [2023-10-18 15:55:39,011] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M6.o1964766 [2023-10-18 15:55:39,020] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M6.o1964766 [2023-10-18 15:55:39,074] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M9.o1964769 [2023-10-18 15:55:39,077] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M9.o1964769 [2023-10-18 15:55:39,077] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M9.o1964769 [2023-10-18 15:55:39,085] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M9.o1964769 [2023-10-18 15:55:39,094] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M9.o1964769 [2023-10-18 15:55:39,109] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: RmStraightPk.qsub [2023-10-18 15:55:39,111] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: RmStraightPk.qsub [2023-10-18 15:55:39,111] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: RmStraightPk.qsub [2023-10-18 15:55:39,115] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: RmStraightPk.qsub [2023-10-18 15:55:39,128] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: RmStraightPk.qsub [2023-10-18 15:55:39,153] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:39,155] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:39,159] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:39,190] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:39,194] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:39,245] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:39,254] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:39,266] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:39,278] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M10.o1964770 [2023-10-18 15:55:39,280] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M10.o1964770 [2023-10-18 15:55:39,280] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M10.o1964770 [2023-10-18 15:55:39,285] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M10.o1964770 [2023-10-18 15:55:39,304] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M10.o1964770 [2023-10-18 15:55:39,357] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_RmStraightPk.sh [2023-10-18 15:55:39,360] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_RmStraightPk.sh [2023-10-18 15:55:39,365] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_RmStraightPk.sh [2023-10-18 15:55:39,401] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M16.o1964775 [2023-10-18 15:55:39,404] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M16.o1964775 [2023-10-18 15:55:39,404] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M16.o1964775 [2023-10-18 15:55:39,414] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M16.o1964775 [2023-10-18 15:55:39,433] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M16.o1964775 [2023-10-18 15:55:39,455] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M8.o1964768 [2023-10-18 15:55:39,458] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M8.o1964768 [2023-10-18 15:55:39,459] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M8.o1964768 [2023-10-18 15:55:39,465] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M8.o1964768 [2023-10-18 15:55:39,475] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M8.o1964768 [2023-10-18 15:55:39,507] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M13.o1964773 [2023-10-18 15:55:39,509] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M13.o1964773 [2023-10-18 15:55:39,510] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M13.o1964773 [2023-10-18 15:55:39,515] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M13.o1964773 [2023-10-18 15:55:39,525] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G215_k4me1_k27ac_k9ac_G215M13.o1964773 [2023-10-18 15:55:39,537] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: remove_straight_peaks.py [2023-10-18 15:55:39,539] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: remove_straight_peaks.py [2023-10-18 15:55:39,539] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: remove_straight_peaks.py [2023-10-18 15:55:39,544] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: remove_straight_peaks.py [2023-10-18 15:55:39,554] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: remove_straight_peaks.py [2023-10-18 15:55:39,560] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: remove_straight_peaks.sh [2023-10-18 15:55:39,562] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: remove_straight_peaks.sh [2023-10-18 15:55:39,567] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: remove_straight_peaks.sh [2023-10-18 15:55:39,945] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:39,949] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:39,950] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:39,954] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:39,964] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:39,979] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M8.o1973521 [2023-10-18 15:55:39,981] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M8.o1973521 [2023-10-18 15:55:39,981] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M8.o1973521 [2023-10-18 15:55:39,986] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M8.o1973521 [2023-10-18 15:55:39,998] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M8.o1973521 [2023-10-18 15:55:40,026] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M6.o1973519 [2023-10-18 15:55:40,029] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M6.o1973519 [2023-10-18 15:55:40,030] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M6.o1973519 [2023-10-18 15:55:40,036] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M6.o1973519 [2023-10-18 15:55:40,048] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M6.o1973519 [2023-10-18 15:55:40,054] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_normbigWig.sh [2023-10-18 15:55:40,056] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_normbigWig.sh [2023-10-18 15:55:40,060] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_normbigWig.sh [2023-10-18 15:55:40,085] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M5.o1973518 [2023-10-18 15:55:40,087] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M5.o1973518 [2023-10-18 15:55:40,088] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M5.o1973518 [2023-10-18 15:55:40,093] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M5.o1973518 [2023-10-18 15:55:40,102] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M5.o1973518 [2023-10-18 15:55:40,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M13.o1973526 [2023-10-18 15:55:40,142] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M13.o1973526 [2023-10-18 15:55:40,142] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M13.o1973526 [2023-10-18 15:55:40,148] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M13.o1973526 [2023-10-18 15:55:40,159] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M13.o1973526 [2023-10-18 15:55:40,180] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M7.o1973520 [2023-10-18 15:55:40,183] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M7.o1973520 [2023-10-18 15:55:40,183] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M7.o1973520 [2023-10-18 15:55:40,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M7.o1973520 [2023-10-18 15:55:40,199] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M7.o1973520 [2023-10-18 15:55:40,236] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M15.o1973527 [2023-10-18 15:55:40,240] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M15.o1973527 [2023-10-18 15:55:40,240] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M15.o1973527 [2023-10-18 15:55:40,247] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M15.o1973527 [2023-10-18 15:55:40,258] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M15.o1973527 [2023-10-18 15:55:40,284] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M10.o1973523 [2023-10-18 15:55:40,288] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M10.o1973523 [2023-10-18 15:55:40,288] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M10.o1973523 [2023-10-18 15:55:40,294] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M10.o1973523 [2023-10-18 15:55:40,304] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M10.o1973523 [2023-10-18 15:55:40,333] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M11.o1973524 [2023-10-18 15:55:40,342] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M11.o1973524 [2023-10-18 15:55:40,343] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M11.o1973524 [2023-10-18 15:55:40,349] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M11.o1973524 [2023-10-18 15:55:40,361] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M11.o1973524 [2023-10-18 15:55:40,392] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M16.o1973528 [2023-10-18 15:55:40,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M16.o1973528 [2023-10-18 15:55:40,396] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M16.o1973528 [2023-10-18 15:55:40,402] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M16.o1973528 [2023-10-18 15:55:40,418] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M16.o1973528 [2023-10-18 15:55:40,451] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M12.o1973525 [2023-10-18 15:55:40,455] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M12.o1973525 [2023-10-18 15:55:40,455] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M12.o1973525 [2023-10-18 15:55:40,460] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M12.o1973525 [2023-10-18 15:55:40,471] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M12.o1973525 [2023-10-18 15:55:40,477] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:40,479] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:40,483] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:40,511] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:40,513] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:40,514] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:40,518] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:40,527] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:40,557] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M9.o1973522 [2023-10-18 15:55:40,560] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M9.o1973522 [2023-10-18 15:55:40,560] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M9.o1973522 [2023-10-18 15:55:40,567] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M9.o1973522 [2023-10-18 15:55:40,577] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G215_k4me1_k27ac_k9ac_G215M9.o1973522 [2023-10-18 15:55:40,595] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: normbigWig.qsub [2023-10-18 15:55:40,597] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: normbigWig.qsub [2023-10-18 15:55:40,598] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: normbigWig.qsub [2023-10-18 15:55:40,602] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: normbigWig.qsub [2023-10-18 15:55:40,614] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: normbigWig.qsub [2023-10-18 15:55:40,631] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2023-10-18 15:55:40,634] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2023-10-18 15:55:40,634] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2023-10-18 15:55:40,639] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2023-10-18 15:55:40,650] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2023-10-18 15:55:40,699] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bigWigToWig [2023-10-18 15:55:40,702] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bigWigToWig [2023-10-18 15:55:40,703] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bigWigToWig [2023-10-18 15:55:40,708] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bigWigToWig [2023-10-18 15:55:40,708] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bigWigToWig [2023-10-18 15:55:40,717] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bigWigToWig [2023-10-18 15:55:40,740] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bedGraphToBigWig [2023-10-18 15:55:40,744] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bedGraphToBigWig [2023-10-18 15:55:40,744] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bedGraphToBigWig [2023-10-18 15:55:40,750] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bedGraphToBigWig [2023-10-18 15:55:40,750] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bedGraphToBigWig [2023-10-18 15:55:40,757] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bedGraphToBigWig [2023-10-18 15:55:40,836] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:40,839] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:40,839] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:40,844] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:40,872] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:40,899] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M9.o1973227 [2023-10-18 15:55:40,901] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M9.o1973227 [2023-10-18 15:55:40,902] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M9.o1973227 [2023-10-18 15:55:40,906] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M9.o1973227 [2023-10-18 15:55:40,925] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M9.o1973227 [2023-10-18 15:55:40,951] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M5.o1973223 [2023-10-18 15:55:40,956] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M5.o1973223 [2023-10-18 15:55:40,957] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M5.o1973223 [2023-10-18 15:55:40,963] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M5.o1973223 [2023-10-18 15:55:40,984] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M5.o1973223 [2023-10-18 15:55:41,001] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER.qsub [2023-10-18 15:55:41,003] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: SICER.qsub [2023-10-18 15:55:41,003] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER.qsub [2023-10-18 15:55:41,008] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SICER.qsub [2023-10-18 15:55:41,036] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER.qsub [2023-10-18 15:55:41,052] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M6.o1973224 [2023-10-18 15:55:41,054] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M6.o1973224 [2023-10-18 15:55:41,054] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M6.o1973224 [2023-10-18 15:55:41,059] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M6.o1973224 [2023-10-18 15:55:41,082] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M6.o1973224 [2023-10-18 15:55:41,104] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M7.o1973225 [2023-10-18 15:55:41,108] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M7.o1973225 [2023-10-18 15:55:41,108] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M7.o1973225 [2023-10-18 15:55:41,117] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M7.o1973225 [2023-10-18 15:55:41,139] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M7.o1973225 [2023-10-18 15:55:41,160] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M8.o1973226 [2023-10-18 15:55:41,162] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M8.o1973226 [2023-10-18 15:55:41,163] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M8.o1973226 [2023-10-18 15:55:41,167] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M8.o1973226 [2023-10-18 15:55:41,190] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M8.o1973226 [2023-10-18 15:55:41,210] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M13.o1973231 [2023-10-18 15:55:41,213] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M13.o1973231 [2023-10-18 15:55:41,213] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M13.o1973231 [2023-10-18 15:55:41,217] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M13.o1973231 [2023-10-18 15:55:41,234] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M13.o1973231 [2023-10-18 15:55:41,254] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M12.o1973230 [2023-10-18 15:55:41,256] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M12.o1973230 [2023-10-18 15:55:41,256] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M12.o1973230 [2023-10-18 15:55:41,262] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M12.o1973230 [2023-10-18 15:55:41,279] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M12.o1973230 [2023-10-18 15:55:41,296] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M15.o1973232 [2023-10-18 15:55:41,298] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M15.o1973232 [2023-10-18 15:55:41,299] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M15.o1973232 [2023-10-18 15:55:41,304] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M15.o1973232 [2023-10-18 15:55:41,321] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M15.o1973232 [2023-10-18 15:55:41,345] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M16.o1973233 [2023-10-18 15:55:41,348] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M16.o1973233 [2023-10-18 15:55:41,348] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M16.o1973233 [2023-10-18 15:55:41,353] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M16.o1973233 [2023-10-18 15:55:41,373] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M16.o1973233 [2023-10-18 15:55:41,390] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M10.o1973228 [2023-10-18 15:55:41,400] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M10.o1973228 [2023-10-18 15:55:41,401] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M10.o1973228 [2023-10-18 15:55:41,407] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M10.o1973228 [2023-10-18 15:55:41,426] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M10.o1973228 [2023-10-18 15:55:41,432] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_macs2.sh [2023-10-18 15:55:41,434] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_macs2.sh [2023-10-18 15:55:41,438] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_macs2.sh [2023-10-18 15:55:41,477] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:41,480] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:41,484] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:41,512] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M11.o1973229 [2023-10-18 15:55:41,516] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M11.o1973229 [2023-10-18 15:55:41,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M11.o1973229 [2023-10-18 15:55:41,523] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M11.o1973229 [2023-10-18 15:55:41,540] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G215_k4me1_k27ac_k9ac_G215M11.o1973229 [2023-10-18 15:55:41,551] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:41,553] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:41,557] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:41,568] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: README.pdf [2023-10-18 15:55:41,586] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER-df.sh [2023-10-18 15:55:41,589] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: SICER-df.sh [2023-10-18 15:55:41,589] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER-df.sh [2023-10-18 15:55:41,599] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SICER-df.sh [2023-10-18 15:55:41,619] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER-df.sh [2023-10-18 15:55:41,635] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER-rb.sh [2023-10-18 15:55:41,638] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: SICER-rb.sh [2023-10-18 15:55:41,638] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER-rb.sh [2023-10-18 15:55:41,642] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SICER-rb.sh [2023-10-18 15:55:41,654] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER-rb.sh [2023-10-18 15:55:41,660] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Changelog [2023-10-18 15:55:41,662] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Changelog [2023-10-18 15:55:41,667] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Changelog [2023-10-18 15:55:41,710] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER.sh [2023-10-18 15:55:41,718] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: SICER.sh [2023-10-18 15:55:41,719] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER.sh [2023-10-18 15:55:41,725] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SICER.sh [2023-10-18 15:55:41,740] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER.sh [2023-10-18 15:55:41,751] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER-df-rb.sh [2023-10-18 15:55:41,753] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: SICER-df-rb.sh [2023-10-18 15:55:41,753] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER-df-rb.sh [2023-10-18 15:55:41,760] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SICER-df-rb.sh [2023-10-18 15:55:41,777] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER-df-rb.sh [2023-10-18 15:55:41,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: test.bed [2023-10-18 15:55:41,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: control.bed [2023-10-18 15:55:41,849] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Background_island_probscore_statistics.py [2023-10-18 15:55:41,852] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Background_island_probscore_statistics.py [2023-10-18 15:55:41,853] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Background_island_probscore_statistics.py [2023-10-18 15:55:41,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Background_island_probscore_statistics.py [2023-10-18 15:55:41,874] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Background_island_probscore_statistics.py [2023-10-18 15:55:41,895] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bed_preprocessing.py [2023-10-18 15:55:41,898] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bed_preprocessing.py [2023-10-18 15:55:41,898] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bed_preprocessing.py [2023-10-18 15:55:41,903] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bed_preprocessing.py [2023-10-18 15:55:41,917] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bed_preprocessing.py [2023-10-18 15:55:41,935] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: GenomeData.py [2023-10-18 15:55:41,938] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GenomeData.py [2023-10-18 15:55:41,938] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: GenomeData.py [2023-10-18 15:55:41,944] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GenomeData.py [2023-10-18 15:55:41,958] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: GenomeData.py [2023-10-18 15:55:41,964] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: get_total_tag_counts.py [2023-10-18 15:55:41,967] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: get_total_tag_counts.py [2023-10-18 15:55:41,973] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: get_total_tag_counts.py [2023-10-18 15:55:41,989] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: UCSC.py [2023-10-18 15:55:41,991] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: UCSC.py [2023-10-18 15:55:41,992] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: UCSC.py [2023-10-18 15:55:41,996] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: UCSC.py [2023-10-18 15:55:42,014] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: UCSC.py [2023-10-18 15:55:42,020] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SeparateByChrom.py [2023-10-18 15:55:42,022] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SeparateByChrom.py [2023-10-18 15:55:42,027] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SeparateByChrom.py [2023-10-18 15:55:42,056] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: make_graph_file.py [2023-10-18 15:55:42,059] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: make_graph_file.py [2023-10-18 15:55:42,059] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: make_graph_file.py [2023-10-18 15:55:42,064] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: make_graph_file.py [2023-10-18 15:55:42,075] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: make_graph_file.py [2023-10-18 15:55:42,081] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Utility.py [2023-10-18 15:55:42,083] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Utility.py [2023-10-18 15:55:42,088] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Utility.py [2023-10-18 15:55:42,125] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BED.py [2023-10-18 15:55:42,129] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: BED.py [2023-10-18 15:55:42,129] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BED.py [2023-10-18 15:55:42,142] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BED.py [2023-10-18 15:55:42,161] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: BED.py [2023-10-18 15:55:42,183] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2023-10-18 15:55:42,187] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2023-10-18 15:55:42,187] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2023-10-18 15:55:42,193] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2023-10-18 15:55:42,204] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2023-10-18 15:55:42,210] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: islands_statistics_pr.py [2023-10-18 15:55:42,213] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: islands_statistics_pr.py [2023-10-18 15:55:42,213] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: islands_statistics_pr.py [2023-10-18 15:55:42,217] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: islands_statistics_pr.py [2023-10-18 15:55:42,229] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: islands_statistics_pr.py [2023-10-18 15:55:42,236] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: convert_summary_to_bed.py [2023-10-18 15:55:42,238] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: convert_summary_to_bed.py [2023-10-18 15:55:42,272] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: get_windows_histogram.py [2023-10-18 15:55:42,274] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: get_windows_histogram.py [2023-10-18 15:55:42,275] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: get_windows_histogram.py [2023-10-18 15:55:42,279] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: get_windows_histogram.py [2023-10-18 15:55:42,290] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: get_windows_histogram.py [2023-10-18 15:55:42,296] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: calculate_cross_correlation_long_range.py [2023-10-18 15:55:42,298] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: calculate_cross_correlation_long_range.py [2023-10-18 15:55:42,298] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: calculate_cross_correlation_long_range.py [2023-10-18 15:55:42,303] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: calculate_cross_correlation_long_range.py [2023-10-18 15:55:42,312] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: calculate_cross_correlation_long_range.py [2023-10-18 15:55:42,318] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: slice_raw_bed.py [2023-10-18 15:55:42,320] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: slice_raw_bed.py [2023-10-18 15:55:42,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: slice_raw_bed.py [2023-10-18 15:55:42,368] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: find_overlapped_islands.py [2023-10-18 15:55:42,372] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: find_overlapped_islands.py [2023-10-18 15:55:42,372] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: find_overlapped_islands.py [2023-10-18 15:55:42,379] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: find_overlapped_islands.py [2023-10-18 15:55:42,389] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: find_overlapped_islands.py [2023-10-18 15:55:42,395] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: filter_raw_tags_by_islands.py [2023-10-18 15:55:42,398] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: filter_raw_tags_by_islands.py [2023-10-18 15:55:42,403] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: filter_raw_tags_by_islands.py [2023-10-18 15:55:42,442] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: filter_summary_graphs.py [2023-10-18 15:55:42,445] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: filter_summary_graphs.py [2023-10-18 15:55:42,445] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: filter_summary_graphs.py [2023-10-18 15:55:42,450] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: filter_summary_graphs.py [2023-10-18 15:55:42,465] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: filter_summary_graphs.py [2023-10-18 15:55:42,471] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fragment-size-estimation.sh [2023-10-18 15:55:42,474] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fragment-size-estimation.sh [2023-10-18 15:55:42,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fragment-size-estimation.sh [2023-10-18 15:55:42,500] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: normalize.py [2023-10-18 15:55:42,503] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: normalize.py [2023-10-18 15:55:42,522] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: find_islands_in_pr.py [2023-10-18 15:55:42,524] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: find_islands_in_pr.py [2023-10-18 15:55:42,524] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: find_islands_in_pr.py [2023-10-18 15:55:42,530] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: find_islands_in_pr.py [2023-10-18 15:55:42,545] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: find_islands_in_pr.py [2023-10-18 15:55:42,580] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: find_union_islands.py [2023-10-18 15:55:42,585] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: find_union_islands.py [2023-10-18 15:55:42,592] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: find_union_islands.py [2023-10-18 15:55:42,609] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: filter_islands_by_significance.py [2023-10-18 15:55:42,611] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: filter_islands_by_significance.py [2023-10-18 15:55:42,629] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: run-make-graph-file-by-chrom.py [2023-10-18 15:55:42,631] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: run-make-graph-file-by-chrom.py [2023-10-18 15:55:42,636] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: run-make-graph-file-by-chrom.py [2023-10-18 15:55:42,676] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2023-10-18 15:55:42,679] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2023-10-18 15:55:42,679] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2023-10-18 15:55:42,684] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2023-10-18 15:55:42,707] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2023-10-18 15:55:42,720] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: associate_tags_with_chip_and_control_w_fc_q.py [2023-10-18 15:55:42,722] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: associate_tags_with_chip_and_control_w_fc_q.py [2023-10-18 15:55:42,722] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: associate_tags_with_chip_and_control_w_fc_q.py [2023-10-18 15:55:42,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: associate_tags_with_chip_and_control_w_fc_q.py [2023-10-18 15:55:42,739] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: associate_tags_with_chip_and_control_w_fc_q.py [2023-10-18 15:55:42,755] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: remove_redundant_reads.py [2023-10-18 15:55:42,758] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: remove_redundant_reads.py [2023-10-18 15:55:42,763] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: remove_redundant_reads.py [2023-10-18 15:55:42,797] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:42,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:42,800] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:42,805] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:42,814] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:42,831] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:42,833] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:42,833] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:42,837] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:42,848] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:42,856] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2023-10-18 15:55:42,858] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2023-10-18 15:55:42,862] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2023-10-18 15:55:42,909] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2023-10-18 15:55:42,912] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2023-10-18 15:55:42,931] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:42,933] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:42,933] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:42,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:42,950] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:42,979] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BED_to_WIG.sh [2023-10-18 15:55:42,982] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BED_to_WIG.sh [2023-10-18 15:55:42,992] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BED_to_WIG.sh [2023-10-18 15:55:43,053] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,056] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,056] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,063] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,063] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,064] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,064] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,064] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,064] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,064] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,065] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,065] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,071] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:43,131] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2023-10-18 15:55:43,135] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2023-10-18 15:55:43,139] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2023-10-18 15:55:43,182] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2023-10-18 15:55:43,184] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2023-10-18 15:55:43,217] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER_Peak_Width.txt [2023-10-18 15:55:43,219] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER_Peak_Width.txt [2023-10-18 15:55:43,250] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,251] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,251] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,252] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,252] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Chr_Peak_Counts.pdf [2023-10-18 15:55:43,253] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,253] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,253] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,254] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,255] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,256] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,256] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,258] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,259] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,259] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,260] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,260] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,262] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,262] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7-W400-G2400-E100.scoreisland.bed [2023-10-18 15:55:43,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:43,287] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Generate_Tracks.sh [2023-10-18 15:55:43,291] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Generate_Tracks.sh [2023-10-18 15:55:43,291] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Generate_Tracks.sh [2023-10-18 15:55:43,298] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Generate_Tracks.sh [2023-10-18 15:55:43,323] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Generate_Tracks.sh [2023-10-18 15:55:43,356] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2023-10-18 15:55:43,359] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2023-10-18 15:55:43,360] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2023-10-18 15:55:43,366] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2023-10-18 15:55:43,375] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2023-10-18 15:55:43,416] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:43,419] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:43,423] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:43,431] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: chrom_state_legend.pdf [2023-10-18 15:55:43,473] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_PileUp.txt [2023-10-18 15:55:43,478] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_PileUp.txt [2023-10-18 15:55:43,479] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_PileUp.txt [2023-10-18 15:55:43,485] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_PileUp.txt [2023-10-18 15:55:43,494] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_PileUp.txt [2023-10-18 15:55:43,511] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle_autoON.txt [2023-10-18 15:55:43,520] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle_autoON.txt [2023-10-18 15:55:43,521] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle_autoON.txt [2023-10-18 15:55:43,527] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle_autoON.txt [2023-10-18 15:55:43,536] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle_autoON.txt [2023-10-18 15:55:43,553] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle.txt [2023-10-18 15:55:43,556] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle.txt [2023-10-18 15:55:43,556] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle.txt [2023-10-18 15:55:43,562] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle.txt [2023-10-18 15:55:43,571] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215_k4me1_k27ac_k9ac_Tracks_Wiggle.txt [2023-10-18 15:55:43,616] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:43,626] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:43,627] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:43,632] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:43,642] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:43,714] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:43,716] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:43,757] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_3.o2058662 [2023-10-18 15:55:43,762] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_3.o2058662 [2023-10-18 15:55:43,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_3.o2058662 [2023-10-18 15:55:43,768] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_3.o2058662 [2023-10-18 15:55:43,782] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_3.o2058662 [2023-10-18 15:55:43,805] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:43,808] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:43,808] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:43,813] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:43,841] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:43,865] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:43,868] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:43,869] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:43,874] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:43,898] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:43,923] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:43,926] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:43,927] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:43,933] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:43,955] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:44,012] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,016] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,022] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,023] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:44,023] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:45,014] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated [2023-10-18 15:55:45,096] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,106] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,106] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,113] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,113] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,113] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,113] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,114] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,114] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,114] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,114] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:45,134] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:46,042] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male [2023-10-18 15:55:46,139] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:46,144] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:46,144] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:46,151] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:46,151] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:46,195] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.hotspot [2023-10-18 15:55:46,198] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:46,199] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:46,200] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:46,200] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:46,201] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:46,223] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:46,225] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:46,226] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:46,230] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:46,230] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:46,288] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.peaks [2023-10-18 15:55:46,345] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,349] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,349] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,356] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,356] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,356] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,356] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,356] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,356] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,356] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,357] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,357] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:46,357] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:47,291] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K27ac_Female.vs.G215K27ac_Male.annotated.nopeaks [2023-10-18 15:55:47,342] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_3_Hotspots_UCSC.bed [2023-10-18 15:55:47,343] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_3.bed [2023-10-18 15:55:47,344] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_3_Hotspots_UCSC.bed [2023-10-18 15:55:47,345] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_3.bed [2023-10-18 15:55:47,404] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:47,409] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:47,409] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:47,415] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:47,432] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2023-10-18 15:55:47,450] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M7.o1967111 [2023-10-18 15:55:47,453] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M7.o1967111 [2023-10-18 15:55:47,453] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M7.o1967111 [2023-10-18 15:55:47,459] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M7.o1967111 [2023-10-18 15:55:47,474] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M7.o1967111 [2023-10-18 15:55:47,492] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M6.o1967110 [2023-10-18 15:55:47,494] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M6.o1967110 [2023-10-18 15:55:47,495] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M6.o1967110 [2023-10-18 15:55:47,500] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M6.o1967110 [2023-10-18 15:55:47,514] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M6.o1967110 [2023-10-18 15:55:47,530] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: macs2.qsub [2023-10-18 15:55:47,533] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: macs2.qsub [2023-10-18 15:55:47,533] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: macs2.qsub [2023-10-18 15:55:47,539] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: macs2.qsub [2023-10-18 15:55:47,555] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: macs2.qsub [2023-10-18 15:55:47,573] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M8.o1967113 [2023-10-18 15:55:47,576] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M8.o1967113 [2023-10-18 15:55:47,576] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M8.o1967113 [2023-10-18 15:55:47,588] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M8.o1967113 [2023-10-18 15:55:47,603] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M8.o1967113 [2023-10-18 15:55:47,623] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M12.o1967121 [2023-10-18 15:55:47,627] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M12.o1967121 [2023-10-18 15:55:47,627] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M12.o1967121 [2023-10-18 15:55:47,634] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M12.o1967121 [2023-10-18 15:55:47,649] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M12.o1967121 [2023-10-18 15:55:47,665] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M5.o1967108 [2023-10-18 15:55:47,668] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M5.o1967108 [2023-10-18 15:55:47,668] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M5.o1967108 [2023-10-18 15:55:47,674] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M5.o1967108 [2023-10-18 15:55:47,697] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M5.o1967108 [2023-10-18 15:55:47,709] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M13.o1967123 [2023-10-18 15:55:47,711] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M13.o1967123 [2023-10-18 15:55:47,711] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M13.o1967123 [2023-10-18 15:55:47,715] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M13.o1967123 [2023-10-18 15:55:47,730] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M13.o1967123 [2023-10-18 15:55:47,742] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M10.o1967117 [2023-10-18 15:55:47,744] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M10.o1967117 [2023-10-18 15:55:47,745] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M10.o1967117 [2023-10-18 15:55:47,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M10.o1967117 [2023-10-18 15:55:47,764] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M10.o1967117 [2023-10-18 15:55:47,781] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M9.o1967115 [2023-10-18 15:55:47,783] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M9.o1967115 [2023-10-18 15:55:47,783] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M9.o1967115 [2023-10-18 15:55:47,788] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M9.o1967115 [2023-10-18 15:55:47,808] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M9.o1967115 [2023-10-18 15:55:47,814] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_macs2.sh [2023-10-18 15:55:47,816] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_macs2.sh [2023-10-18 15:55:47,820] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_macs2.sh [2023-10-18 15:55:47,852] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:47,856] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:47,860] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2023-10-18 15:55:47,895] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M11.o1967119 [2023-10-18 15:55:47,898] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M11.o1967119 [2023-10-18 15:55:47,899] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M11.o1967119 [2023-10-18 15:55:47,910] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M11.o1967119 [2023-10-18 15:55:47,926] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M11.o1967119 [2023-10-18 15:55:47,932] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:47,935] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:47,968] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M15.o1967125 [2023-10-18 15:55:47,973] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M15.o1967125 [2023-10-18 15:55:47,973] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M15.o1967125 [2023-10-18 15:55:47,980] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M15.o1967125 [2023-10-18 15:55:48,004] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M15.o1967125 [2023-10-18 15:55:48,025] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M16.o1967127 [2023-10-18 15:55:48,029] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M16.o1967127 [2023-10-18 15:55:48,029] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M16.o1967127 [2023-10-18 15:55:48,035] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M16.o1967127 [2023-10-18 15:55:48,053] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G215_k4me1_k27ac_k9ac_G215M16.o1967127 [2023-10-18 15:55:48,073] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:48,075] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:48,076] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:48,083] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:48,096] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.R [2023-10-18 15:55:48,110] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:48,114] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:48,120] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:48,127] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:48,141] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.sh [2023-10-18 15:55:48,148] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2023-10-18 15:55:48,151] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2023-10-18 15:55:48,157] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2023-10-18 15:55:48,196] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2023-10-18 15:55:48,199] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2023-10-18 15:55:48,239] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:48,243] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:48,243] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:48,250] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:48,263] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2023-10-18 15:55:48,293] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BED_to_WIG.sh [2023-10-18 15:55:48,295] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BED_to_WIG.sh [2023-10-18 15:55:48,300] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BED_to_WIG.sh [2023-10-18 15:55:48,364] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,368] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,369] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,374] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,374] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,375] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,375] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,375] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,375] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,375] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,375] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,375] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,381] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bedToBigBed [2023-10-18 15:55:48,388] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2023-10-18 15:55:48,391] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2023-10-18 15:55:48,396] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2023-10-18 15:55:48,441] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: MACS2_Peak_Width.txt [2023-10-18 15:55:48,443] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: MACS2_Peak_Width.txt [2023-10-18 15:55:48,461] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2023-10-18 15:55:48,464] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2023-10-18 15:55:48,498] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,498] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,499] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,499] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,500] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,501] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,501] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Chr_Peak_Counts.pdf [2023-10-18 15:55:48,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,503] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,503] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,504] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,505] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M13_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,505] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,506] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,507] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M12_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,508] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,508] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M9_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,509] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,510] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M11_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,510] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M16_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,511] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,512] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M10_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:48,513] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:48,572] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:48,576] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:48,577] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:48,583] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:48,593] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2023-10-18 15:55:48,617] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_1.o2004281 [2023-10-18 15:55:48,622] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_1.o2004281 [2023-10-18 15:55:48,622] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_1.o2004281 [2023-10-18 15:55:48,628] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_1.o2004281 [2023-10-18 15:55:48,644] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_10_G215_k4me1_k27ac_k9ac_diffReps_1.o2004281 [2023-10-18 15:55:48,719] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:48,721] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2023-10-18 15:55:48,763] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:48,766] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:48,767] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:48,773] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:48,796] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2023-10-18 15:55:48,823] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:48,827] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:48,827] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:48,833] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:48,865] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.R [2023-10-18 15:55:48,890] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:48,894] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:48,894] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:48,901] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:48,917] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_Summary.sh [2023-10-18 15:55:48,975] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:48,978] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:48,979] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:48,985] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:48,985] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:49,064] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated [2023-10-18 15:55:49,096] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:49,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:49,100] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:49,106] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:49,106] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:49,175] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male [2023-10-18 15:55:49,228] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:49,231] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:49,232] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:49,238] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:49,247] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.hotspot [2023-10-18 15:55:49,248] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M5_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:49,249] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:49,249] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M7_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:49,250] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M8_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:49,251] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2023-10-18 15:55:49,275] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:49,280] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:49,280] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:49,291] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:49,291] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:49,365] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.nopeaks [2023-10-18 15:55:49,386] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:49,394] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:49,395] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:49,400] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:49,410] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps_G215K4me1_Female.vs.G215K4me1_Male.annotated.peaks [2023-10-18 15:55:49,412] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_FDR_Barchart.pdf [2023-10-18 15:55:49,434] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_Histogram.pdf [2023-10-18 15:55:49,437] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_1.peak_filtered.bed [2023-10-18 15:55:49,438] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Female_diffReps_1.peak_filtered.bed [2023-10-18 15:55:49,465] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_1_annotated.txt [2023-10-18 15:55:49,468] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_1_annotated.txt [2023-10-18 15:55:49,487] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_Peaks_UCSC.bed [2023-10-18 15:55:49,511] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_Hotspots_UCSC.bed [2023-10-18 15:55:49,531] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_1.bed [2023-10-18 15:55:49,532] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_600.peak_filtered.bed [2023-10-18 15:55:49,532] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_200.peak_filtered.bed [2023-10-18 15:55:49,533] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_FDR_Barchart.pdf [2023-10-18 15:55:49,555] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_Histogram.pdf [2023-10-18 15:55:49,558] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Female_diffReps_1.bed [2023-10-18 15:55:49,611] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_1.bed [2023-10-18 15:55:49,623] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_1_annotated.txt [2023-10-18 15:55:49,626] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Male_diffReps_1_annotated.txt [2023-10-18 15:55:49,654] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_1_annotated.txt [2023-10-18 15:55:49,656] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_1_annotated.txt [2023-10-18 15:55:49,656] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_1_annotated.txt [2023-10-18 15:55:49,661] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_1_annotated.txt [2023-10-18 15:55:49,669] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215K4me1_Female_diffReps_1_annotated.txt [2023-10-18 15:55:49,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_Peaks_UCSC.bed [2023-10-18 15:55:49,689] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: diffReps_1_Hotspots_UCSC.bed [2023-10-18 15:55:49,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: BG_Sites_diffReps_1.bed [2023-10-18 15:55:49,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_200.bed [2023-10-18 15:55:49,717] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215K4me1_Male_diffReps_Top_600.bed [2023-10-18 15:55:49,761] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:55:49,764] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:55:49,765] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_sorted_mapped.bam.bai [2023-10-18 15:55:49,765] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_alignments.bam [2023-10-18 15:55:49,794] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_alignments.bam.bai [2023-10-18 15:55:49,794] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_sorted_mapped.bam [2023-10-18 15:55:49,825] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,829] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,829] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,836] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:49,847] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:50,377] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:50,441] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,444] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,445] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,451] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:50,463] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:51,048] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:51,096] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:51,098] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:51,098] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:51,103] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:51,103] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:51,109] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:51,147] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,156] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,156] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,162] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,162] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,162] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,162] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,162] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,163] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,163] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,163] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,173] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,586] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:51,645] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:51,649] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:51,650] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:51,656] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:51,656] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:51,663] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:51,664] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:55:51,665] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:51,693] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,697] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,697] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,703] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,703] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,703] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,703] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,704] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,704] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,704] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,704] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:51,712] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:52,141] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_read_MACS2_peaks.out1 [2023-10-18 15:55:52,164] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_summits.bed [2023-10-18 15:55:52,185] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:55:52,185] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:55:52,186] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:55:52,197] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:52,201] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:52,221] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:55:52,221] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:55:52,222] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:55:52,266] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,270] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,271] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,276] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:52,299] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:53,411] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_read_Peak_Union.out1 [2023-10-18 15:55:53,476] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:55:53,477] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_filtered_StrgtPks_sorted.bam [2023-10-18 15:55:53,477] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_StrgtPks_tab.bed [2023-10-18 15:55:53,478] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_StrgtPksRm_tab.bed [2023-10-18 15:55:53,478] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_filtered_StrgtPks.bam.bai [2023-10-18 15:55:53,479] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_filtered_StrgtPks.bam [2023-10-18 15:55:53,481] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15_hist.pdf [2023-10-18 15:55:53,498] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_metrics [2023-10-18 15:55:53,502] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_metrics [2023-10-18 15:55:53,503] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_metrics [2023-10-18 15:55:53,508] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_metrics [2023-10-18 15:55:53,524] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_metrics [2023-10-18 15:55:53,526] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-1-removed.bed [2023-10-18 15:55:53,528] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:55:53,556] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:53,561] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:53,561] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:53,567] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:53,567] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:53,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland.bb [2023-10-18 15:55:53,600] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:55:53,625] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,628] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,629] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,636] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:53,648] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:54,198] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15_read_SICER.out1 [2023-10-18 15:55:54,251] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,255] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,255] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,262] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,262] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,262] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,262] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,262] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,262] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,262] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,787] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M15-W400-G2400-E100.scoreisland [2023-10-18 15:55:54,818] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:55:54,845] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:55:54,845] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:55:54,846] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:55:54,857] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:54,860] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:54,875] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:55:54,875] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M15-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:55:54,883] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1.fastq.gz [2023-10-18 15:55:54,886] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_CKDL230032530-1A_H77VKDSX7_L3_R2.fastq.gz [2023-10-18 15:55:54,887] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_sorted_mapped.bam.bai [2023-10-18 15:55:54,888] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_alignments.bam [2023-10-18 15:55:54,891] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_alignments.bam.bai [2023-10-18 15:55:54,916] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_sorted_mapped.bam [2023-10-18 15:55:54,947] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,951] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,951] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,957] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,957] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,958] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,958] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,958] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,958] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,958] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,958] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:54,979] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:56,090] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_read_Peak_Union.out1 [2023-10-18 15:55:56,202] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:56,206] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:56,206] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:56,213] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:56,213] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:56,220] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak.bb [2023-10-18 15:55:56,222] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak.bed [2023-10-18 15:55:56,248] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,252] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,253] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,258] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,258] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,258] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,258] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,258] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,258] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,259] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,259] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,265] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,531] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.gappedPeak [2023-10-18 15:55:56,579] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_read_MACS2_peaks.out1 [2023-10-18 15:55:56,584] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_read_MACS2_peaks.out1 [2023-10-18 15:55:56,584] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_read_MACS2_peaks.out1 [2023-10-18 15:55:56,590] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_read_MACS2_peaks.out1 [2023-10-18 15:55:56,590] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_read_MACS2_peaks.out1 [2023-10-18 15:55:56,643] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_read_MACS2_peaks.out1 [2023-10-18 15:55:56,669] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:56,673] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:56,679] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:56,685] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:56,692] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak.bb [2023-10-18 15:55:56,702] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:56,704] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:56,705] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:56,709] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:56,709] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:56,770] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_narrow_MACS2_peaks.narrowPeak [2023-10-18 15:55:56,800] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,804] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,805] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,813] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,813] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,813] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,813] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,814] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,814] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:56,814] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:57,080] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_broad_MACS2_peaks.broadPeak [2023-10-18 15:55:57,096] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_broad_MACS2_peaks.broadPeak.bed [2023-10-18 15:55:57,096] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_summits.bed [2023-10-18 15:55:57,125] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak_unique.bed [2023-10-18 15:55:57,125] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:55:57,126] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2023-10-18 15:55:57,126] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2023-10-18 15:55:57,133] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:57,135] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:55:57,150] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_narrow_MACS2_peaks.narrowPeak_common.bed [2023-10-18 15:55:57,151] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:55:57,152] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_filtered_StrgtPks.bam [2023-10-18 15:55:57,152] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_filtered_StrgtPks.bam.bai [2023-10-18 15:55:57,153] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_filtered_StrgtPks_sorted.bam [2023-10-18 15:55:57,154] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_StrgtPksRm_tab.bed [2023-10-18 15:55:57,154] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_filtered_StrgtPks_sorted.bam.bai [2023-10-18 15:55:57,155] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_StrgtPks_tab.bed [2023-10-18 15:55:57,223] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,227] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,227] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,233] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,233] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,233] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,234] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,234] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,234] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,234] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,665] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_read_SICER.out1 [2023-10-18 15:55:57,721] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,725] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,726] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,731] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,731] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,731] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,731] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,731] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,731] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:57,732] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:58,129] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland [2023-10-18 15:55:58,178] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,180] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,181] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:55:58,185] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:56:06,378] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100-islandfiltered-normalized.wig [2023-10-18 15:56:06,883] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Omitted_Peaks.bed [2023-10-18 15:56:06,884] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-W400-G2400-E100-islandfiltered.bed [2023-10-18 15:56:06,907] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland.bb [2023-10-18 15:56:06,910] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland.bb [2023-10-18 15:56:06,910] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland.bb [2023-10-18 15:56:06,915] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland.bb [2023-10-18 15:56:06,915] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland.bb [2023-10-18 15:56:06,922] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6-W400-G2400-E100.scoreisland.bb [2023-10-18 15:56:06,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-1-removed.bed [2023-10-18 15:56:06,924] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2023-10-18 15:56:06,925] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2023-10-18 15:56:06,930] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:56:06,932] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2023-10-18 15:56:06,945] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2023-10-18 15:56:06,945] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2023-10-18 15:56:06,946] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-W400-G2400-E100.scoreisland_unique.bed [2023-10-18 15:56:06,946] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6-W400-G2400-E100.scoreisland_common.bed [2023-10-18 15:56:06,948] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G215M6_hist.pdf [2023-10-18 15:56:06,966] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G215M6_metrics [2023-10-18 15:56:06,969] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G215M6_metrics [2023-10-18 15:56:06,969] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G215M6_metrics [2023-10-18 15:56:06,974] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G215M6_metrics [2023-10-18 15:56:06,995] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G215M6_metrics [2023-10-18 15:56:07,627] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.1.2 [2023-10-18 15:56:08,526] multiqc.modules.macs2.macs2 [INFO ] Found 22 logs [2023-10-18 15:56:08,534] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.1.2 [2023-10-18 15:56:08,600] multiqc.modules.picard.picard [INFO ] Found 11 InsertSizeMetrics reports [2023-10-18 15:56:08,621] multiqc.modules.samtools.samtools [INFO ] Found 11 flagstat reports [2023-10-18 15:56:08,629] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M7_idxstats [2023-10-18 15:56:08,630] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M5_idxstats [2023-10-18 15:56:08,630] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M11_idxstats [2023-10-18 15:56:08,631] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M16_idxstats [2023-10-18 15:56:08,633] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M9_idxstats [2023-10-18 15:56:08,634] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M8_idxstats [2023-10-18 15:56:08,634] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M13_idxstats [2023-10-18 15:56:08,636] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M12_idxstats [2023-10-18 15:56:08,638] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M10_idxstats [2023-10-18 15:56:08,639] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M7_idxstats [2023-10-18 15:56:08,640] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M5_idxstats [2023-10-18 15:56:08,641] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M11_idxstats [2023-10-18 15:56:08,641] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M16_idxstats [2023-10-18 15:56:08,642] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M15_idxstats [2023-10-18 15:56:08,643] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M9_idxstats [2023-10-18 15:56:08,645] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M8_idxstats [2023-10-18 15:56:08,646] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M13_idxstats [2023-10-18 15:56:08,647] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M6_idxstats [2023-10-18 15:56:08,648] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M12_idxstats [2023-10-18 15:56:08,649] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M10_idxstats [2023-10-18 15:56:08,666] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M15_idxstats [2023-10-18 15:56:08,667] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G215M6_idxstats [2023-10-18 15:56:08,678] multiqc.modules.samtools.samtools [INFO ] Found 11 idxstats reports [2023-10-18 15:56:08,686] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M11_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,690] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M16_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,691] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M15_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,693] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M12_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,694] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M13_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,695] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M7_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,697] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M9_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,698] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M5_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,699] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M10_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,702] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M8_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,704] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G215M6_CKDL230032530-1A_H77VKDSX7_L3_R1' [2023-10-18 15:56:08,704] multiqc.modules.bowtie2.bowtie2 [INFO ] Found 12 reports [2023-10-18 15:56:12,797] multiqc.modules.fastqc.fastqc [INFO ] Found 22 reports [2023-10-18 15:56:13,563] multiqc [INFO ] Compressing plot data [2023-10-18 15:56:14,405] multiqc [INFO ] Report : Job_Summary/G215_k4me1_k27ac_k9ac_MULTIQC/multiqc_report.html [2023-10-18 15:56:14,406] multiqc [INFO ] Data : Job_Summary/G215_k4me1_k27ac_k9ac_MULTIQC/multiqc_data [2023-10-18 15:56:14,406] multiqc [DEBUG ] Moving data file from '/scratch/tmpcjq796bu/multiqc_data' to 'Job_Summary/G215_k4me1_k27ac_k9ac_MULTIQC/multiqc_data' [2023-10-18 15:56:14,544] multiqc [INFO ] MultiQC complete