FastQCFastQC Report
Wed 30 Nov 2022
G196M12_CKDL220030812-1A_HK7H2DSX5_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG196M12_CKDL220030812-1A_HK7H2DSX5_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24494425
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTAT649630.26521545208756686TruSeq Adapter, Index 6 (97% over 36bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTTT248650.10151289528127318TruSeq Adapter, Index 6 (97% over 36bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)