FastQCFastQC Report
Thu 3 Aug 2023
G157-M9-Index21_GTTTCG-_ACB0DPANXX_L002_001.R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG157-M9-Index21_GTTTCG-_ACB0DPANXX_L002_001.R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15703722
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN247510.15761231636678236No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)