zUMIs-master/zUMIs-master.sh -f data/demult_HEK_r1.fq.gz -r data/demult_HEK_r2.fq.gz -c 1-6 -m 7-16 -p 16 -q 17 -Q 17 -l 50 -b reference/SCRBseq_96_setC_justBCs.txt -a reference/Homo_sapiens.GRCh38.84_chrsNamesUCSC.gtf -g reference/STAR5idx_noGTF -o run_dir/ -n HEK