#lnc	lncGeneSymbol	ortholog	orthologGeneSymbol	alignScore	exonID	locusID	indelRate(exon)	indelRate(intron)	lncExonsAligned	orthExonsAligned	spliceConserved	spliceTotal	category(mm9)	category(hg19)
TCONS_00165932	A630072M18Rik	uc003ugk.4	RSBN1L-AS1	151546	0.17	0.62	0.035	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00169121	Unannotated	uc021xpk.1	LOC100505702	140789	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	intergenic
TCONS_00169120	Unannotated	uc021xpk.1	LOC100505702	127096	0.00	0.56	NA	0.074	NA	NA	0.0	1	intergenic	intergenic
TCONS_00169123	Unannotated	uc021xpk.1	LOC100505702	17745	0.00	0.63	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00169122	Unannotated	uc021xpk.1	LOC100505702	18335	0.37	0.56	0.079	0.080	3,	3,	0.0	2	intergenic	intergenic
TCONS_00171071	Unannotated	h1.naive_gene.v2.1_1473.0_chr12	Unannotated	127770	0.12	0.36	0.067	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00166309	1700096K18Rik	uc011kvo.2	LOC100128822	25845	0.30	0.30	0.073	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00167485	Unannotated	uc003gna.1	AK091889	151152	0.00	0.82	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167486	Unannotated	uc003gna.1	AK091889	204113	0.00	0.66	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167487	Unannotated	uc003gna.1	AK091889	190283	0.00	0.71	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167480	Unannotated	uc003gna.1	AK091889	64255	0.00	0.66	NA	1.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167481	Unannotated	uc003gna.1	AK091889	137375	0.00	0.71	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167482	Unannotated	uc003gna.1	AK091889	40122	0.00	0.48	NA	0.080	NA	NA	0.0	1	intergenic	mir_host_intron
TCONS_00167483	Unannotated	uc003gna.1	AK091889	94926	0.00	0.63	NA	0.333	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167488	Unannotated	uc003gna.1	AK091889	128544	0.00	0.62	NA	0.250	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167489	Unannotated	uc003gna.1	AK091889	43322	0.00	0.56	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00176788	Unannotated	uc021xpk.1	LOC100505702	8792	0.00	0.00	NA	NA	NA	NA	0.0	1	intergenic	intergenic
TCONS_00170235	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00165930	A630072M18Rik	uc003ugk.4	RSBN1L-AS1	151546	0.11	0.23	0.035	NA	2,	1,	0.0	1	intergenic	intergenic
TCONS_00175762	AK078321	uc031sec.1	UCHL1-AS1	45634	0.04	0.03	0.040	0.051	5,	2,	0.5	2	divergent	divergent
TCONS_00169116	Unannotated	uc021xpk.1	LOC100505702	45828	0.00	0.68	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00169117	Unannotated	uc021xpk.1	LOC100505702	127096	0.00	0.57	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00169118	Unannotated	uc021xpk.1	LOC100505702	18335	0.29	0.52	0.079	0.080	3,	3,	0.0	2	intergenic	intergenic
TCONS_00169119	Unannotated	uc021xpk.1	LOC100505702	140789	0.00	0.83	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00176785	Unannotated	uc021xpk.1	LOC100505702	8792	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170234	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.03	0.05	0.078	1.000	2,	1,	0.0	0	intergenic	intergenic
TCONS_00176787	Unannotated	uc021xpk.1	LOC100505702	8792	0.00	0.00	NA	NA	NA	NA	0.0	2	intergenic	intergenic
TCONS_00176786	Unannotated	uc021xpk.1	LOC100505702	8792	0.00	0.00	NA	NA	NA	NA	0.0	2	intergenic	intergenic
TCONS_00181378	AK079377	uc001usu.3	LINC00426	60763	0.00	0.29	NA	0.078	NA	NA	0.0	2	intergenic	intergenic
TCONS_00181379	AK079377	uc001usu.3	LINC00426	60763	0.00	0.26	NA	0.076	NA	NA	0.0	4	intergenic	intergenic
TCONS_00181376	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	NA	1,	4,	0.0	1	intergenic	intergenic
TCONS_00181377	AK079377	uc001usu.3	LINC00426	52401	0.00	0.43	NA	0.079	NA	NA	0.0	2	intergenic	intergenic
TCONS_00181374	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	0.065	1,	4,	0.0	3	intergenic	intergenic
TCONS_00181375	AK079377	uc001usu.3	LINC00426	96138	0.01	0.46	0.015	0.069	1,	4,	0.0	2	intergenic	intergenic
TCONS_00181372	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	0.067	1,	4,	0.0	2	intergenic	intergenic
TCONS_00181373	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	0.068	1,	4,	0.0	2	intergenic	intergenic
TCONS_00181370	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	0.067	1,	4,	0.0	2	intergenic	intergenic
TCONS_00181371	AK079377	uc001usu.3	LINC00426	96138	0.01	0.46	0.015	0.067	1,	4,	0.0	3	intergenic	intergenic
TCONS_00167493	Unannotated	uc003gna.1	AK091889	208878	0.00	0.70	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167492	Unannotated	uc003gna.1	AK091889	116359	0.00	0.64	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167491	Unannotated	uc003gna.1	AK091889	51132	0.00	0.70	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167490	Unannotated	uc003gna.1	AK091889	140463	0.00	0.74	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167497	Unannotated	uc003gna.1	AK091889	140538	0.00	0.71	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167495	Unannotated	uc003gna.1	AK091889	171560	0.00	0.62	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00167494	Unannotated	uc003gna.1	AK091889	72249	0.00	0.68	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00178879	Unannotated	uc021rfi.1	JB023063	53483	0.00	0.00	NA	1.000	NA	NA	0.0	0	divergent	intergenic
TCONS_00167498	Unannotated	uc003gna.1	AK091889	46543	0.00	0.58	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00181383	Unannotated	uc001usu.3	LINC00426	29246	0.05	0.26	0.083	0.000	1,	1,	0.0	0	intergenic	intergenic
TCONS_00181382	Unannotated	uc001usu.3	LINC00426	29246	0.00	0.55	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00181381	AK079377	uc001usu.3	LINC00426	60763	0.00	0.23	NA	0.076	NA	NA	0.0	4	intergenic	intergenic
TCONS_00181380	AK079377	uc001usu.3	LINC00426	60763	0.00	0.25	NA	0.076	NA	NA	0.0	4	intergenic	intergenic
TCONS_00181384	Unannotated	uc001usu.3	LINC00426	59069	0.00	0.00	NA	NA	NA	NA	0.0	2	intergenic	intergenic
TCONS_00172141	AK134703	uc011kjy.2	PCOLCE-AS1	282192	0.14	0.62	0.035	0.049	1,2,3,	3,4,5,6,	0.5	2	intergenic	intergenic
TCONS_00172309	Unannotated	uc021zyh.1	FLJ44511	408847	0.36	0.49	0.052	NA	1,	1,2,3,	0.0	0	divergent	intergenic
TCONS_00166592	Unannotated	uc021vex.1	TRNA	381611	0.13	0.13	0.000	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00166296	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115621	0.04	0.10	0.063	0.058	1,2,	2,3,	0.0	2	divergent	divergent
TCONS_00166297	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115621	0.14	0.45	0.063	0.000	1,	2,3,	0.0	0	divergent	divergent
TCONS_00166294	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115621	0.04	0.11	0.059	0.062	1,3,	2,3,	0.0	2	divergent	divergent
TCONS_00166295	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115621	0.08	0.10	0.063	0.000	1,	2,3,	0.0	2	divergent	divergent
TCONS_00181369	AK079377	uc001usu.3	LINC00426	96138	0.01	0.46	0.015	0.069	1,	4,	0.0	2	intergenic	intergenic
TCONS_00181368	AK079377	uc001usu.3	LINC00426	96138	0.01	0.46	0.015	0.069	1,	4,	0.0	2	intergenic	intergenic
TCONS_00166290	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115683	0.04	0.12	0.063	0.000	1,	2,3,	0.0	2	divergent	divergent
TCONS_00171358	AK017106	uc001uhp.2	FLJ37505	96105	0.12	0.16	0.096	0.076	4,	3,	0.0	2	intergenic	intergenic
TCONS_00181365	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	0.068	1,	4,	0.0	3	intergenic	intergenic
TCONS_00181364	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	NA	1,	4,	0.0	2	intergenic	intergenic
TCONS_00181367	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	0.067	1,	4,	0.0	1	intergenic	intergenic
TCONS_00181366	AK079377	uc001usu.3	LINC00426	96138	0.01	0.46	0.015	0.069	1,	4,	0.0	1	intergenic	intergenic
TCONS_00181361	AK079377	uc001usu.3	LINC00426	25943	0.00	0.56	NA	0.075	NA	NA	0.0	2	intergenic	intergenic
TCONS_00181360	AK079377	uc001usu.3	LINC00426	17558	0.00	0.55	NA	0.080	NA	NA	0.0	1	intergenic	intergenic
TCONS_00181363	AK079377	uc001usu.3	LINC00426	96138	0.00	0.46	0.015	0.068	1,	4,	0.0	2	intergenic	intergenic
TCONS_00181362	AK079377	uc001usu.3	LINC00426	25943	0.00	0.56	NA	0.077	NA	NA	0.0	3	intergenic	intergenic
TCONS_00165710	Unannotated	uc022atm.1	MIR548O2	57894	0.00	0.62	NA	0.042	NA	NA	0.0	1	intergenic	intergenic
TCONS_00174497	Unannotated	uc002rlz.1	AK055918	795399	0.01	0.14	0.016	0.000	1,	1,	0.0	0	intergenic	intergenic
TCONS_00170237	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170236	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.02	0.05	0.078	1.000	2,	1,	0.0	0	intergenic	intergenic
TCONS_00173733	AK017143	uc003vck.2	LOC100216545	376870	0.34	0.06	0.021	1.000	1,	1,	0.0	0	divergent	divergent
TCONS_00170225	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.03	0.05	0.078	1.000	2,	1,	0.0	0	intergenic	intergenic
TCONS_00170226	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170227	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.05	0.05	0.071	NA	2,	1,	0.0	0	intergenic	intergenic
TCONS_00173737	AK017143	uc003vcj.2	LOC100216546	38359	0.40	0.22	0.080	NA	3,	1,	0.0	0	divergent	intergenic
TCONS_00173736	AK017143	uc003vcj.2	LOC100216546	38359	0.22	0.22	0.080	NA	1,	1,	0.0	0	divergent	intergenic
TCONS_00173735	AK017143	uc003vck.2	LOC100216545	376870	0.81	0.10	0.021	1.000	1,	1,	0.0	0	divergent	divergent
TCONS_00175611	Unannotated	uc003gtf.3	FLJ13197	414648	0.00	0.75	NA	0.000	NA	NA	0.0	0	divergent	intergenic
TCONS_00165829	Unannotated	uc003uir.4	TP53TG1	14576	0.00	0.54	NA	NA	NA	NA	0.0	0	intergenic	divergent
TCONS_00173739	AK017143	uc003vcj.2	LOC100216546	38359	0.39	0.22	0.080	NA	2,	1,	0.0	0	divergent	intergenic
TCONS_00173738	AK017143	uc003vcj.2	LOC100216546	38359	0.23	0.22	0.080	NA	2,	1,	0.0	0	divergent	intergenic
TCONS_00170228	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.05	0.05	0.071	NA	2,	1,	0.0	0	intergenic	intergenic
TCONS_00170229	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00165933	Unannotated	uc003ugj.1	RSBN1L-AS1	30414	0.00	0.56	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00168679	Unannotated	uc021xpa.1	U6	196176	0.01	0.01	0.095	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00177107	Unannotated	uc010ikd.2	BC005018	38526	0.00	0.60	NA	0.074	NA	NA	0.0	1	intergenic	intergenic
TCONS_00170233	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170232	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.03	0.05	0.078	1.000	2,	1,	0.0	0	intergenic	intergenic
TCONS_00170231	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170230	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.04	0.05	0.078	1.000	2,	1,	0.0	0	intergenic	intergenic
TCONS_00175601	BC038278	uc022bhz.1	LOC100507299	26245	0.00	0.40	NA	0.080	NA	NA	0.0	2	intergenic	intergenic
TCONS_00175600	BC038278	uc022bhz.1	LOC100507299	26245	0.00	0.40	NA	0.079	NA	NA	0.0	3	intergenic	intergenic
TCONS_00175603	BC038278	uc022bhz.1	LOC100507299	26245	0.00	0.40	NA	0.080	NA	NA	0.0	3	intergenic	intergenic
TCONS_00175602	BC038278	uc022bhz.1	LOC100507299	26245	0.00	0.42	NA	0.081	NA	NA	0.0	2	intergenic	intergenic
TCONS_00170239	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170238	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00173740	AK017143	uc003vcj.2	LOC100216546	38359	0.36	0.22	0.080	NA	3,	1,	0.0	0	divergent	intergenic
TCONS_00173741	AK017143	uc003vck.2	LOC100216545	376870	0.78	0.78	0.035	NA	1,	1,	0.0	0	divergent	divergent
TCONS_00170224	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.04	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00168012	Unannotated	uc003gup.1	BC040333	129078	0.01	0.25	0.068	NA	1,	1,2,	0.0	0	intergenic	divergent
TCONS_00177374	AK138287	h1.naive_gene.v2.1_3382.0_chr1	Unannotated	1016714	0.72	0.74	0.024	0.046	1,2,	1,2,	1.0	1	intergenic	intergenic
TCONS_00166115	AK002390	gene.v2.1_1004.0_chr7_2.615.ADD	Unannotated	37144	0.28	0.57	0.073	0.068	2,3,4,	2,3,4,	2.0	3	sno_host	sno_host
TCONS_00166114	AK002390	gene.v2.1_1004.0_chr7_2.615.ADD	Unannotated	37144	0.28	0.57	0.073	0.067	2,3,4,	2,3,4,	2.0	3	sno_host	sno_host
TCONS_00166292	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115621	0.01	0.11	0.059	0.062	1,3,	2,3,	0.0	2	divergent	divergent
TCONS_00177194	Unannotated	uc003hph.2	WDFY3-AS2	10802	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	divergent
TCONS_00166119	Unannotated	uc003svl.3	SNORD93	35109	0.84	0.84	0.021	NA	1,	1,	0.0	0	sno_host	sno_host
TCONS_00170246	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170247	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.02	0.05	0.081	1.000	2,3,	1,	0.0	0	divergent	intergenic
TCONS_00170244	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170245	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.06	0.05	0.078	1.000	2,	1,	0.0	0	intergenic	intergenic
TCONS_00170242	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170243	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.00	0.05	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00170240	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.03	0.05	0.078	1.000	3,	1,	0.0	0	intergenic	intergenic
TCONS_00170241	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.02	0.05	0.078	1.000	2,	1,	0.0	0	intergenic	intergenic
TCONS_00166479	Unannotated	uc003svi.2	LOC100506178	90651	0.00	0.03	NA	0.079	NA	NA	0.0	2	intergenic	intergenic
TCONS_00177925	AK039279	uc003ado.3	TTC28-AS1	43596	0.09	0.29	0.078	0.000	1,	1,	0.0	0	divergent	mir_host_intron
TCONS_00170248	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.02	0.05	0.081	1.000	2,3,	1,	0.0	0	divergent	intergenic
TCONS_00170249	Unannotated	uc010szm.1	HNF1A-AS1	183485	0.02	0.05	0.081	1.000	2,3,	1,	0.0	0	divergent	intergenic
TCONS_00166293	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115621	0.02	0.11	0.059	0.062	1,3,	2,3,	0.0	2	divergent	divergent
TCONS_00168311	2700023E23Rik	uc003gzo.2	DANCR	31880	0.15	0.28	0.083	0.044	1,2,3,	1,2,3,	1.0	2	sno_host	sno_host
TCONS_00168313	2700023E23Rik	uc003gzo.2	DANCR	31880	0.13	0.27	0.084	0.048	1,2,	2,3,	0.5	1	sno_host	sno_host
TCONS_00168312	2700023E23Rik	uc003gzo.2	DANCR	31880	0.37	0.69	0.084	0.035	1,2,	1,2,3,	0.5	1	sno_host	sno_host
TCONS_00168314	2700023E23Rik	uc003gzq.1	SNORA26	31880	0.90	0.91	0.016	0.000	1,	1,	0.0	0	sno_host	sno_host
TCONS_00169141	AK015518	uc003hlv.3	LOC100506035	241390	0.03	0.10	0.017	0.073	5,	3,	1.0	3	intergenic	intergenic
TCONS_00178880	Unannotated	uc021rfi.1	JB023063	53483	0.00	0.00	NA	1.000	NA	NA	0.0	0	divergent	intergenic
TCONS_00178881	Unannotated	uc021rfi.1	JB023063	53483	0.00	0.00	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00169700	Unannotated	uc021opy.1	LOC100131564	40535	0.00	0.62	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00169235	Unannotated	uc003hph.2	WDFY3-AS2	272050	0.00	0.67	NA	0.000	NA	NA	0.0	0	intergenic	divergent
TCONS_00169234	Unannotated	uc003hph.2	WDFY3-AS2	280993	0.09	0.67	0.019	0.050	2,	2,	0.0	1	intergenic	divergent
TCONS_00165931	A630072M18Rik	uc003ugk.4	RSBN1L-AS1	151546	0.10	0.56	0.035	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00179486	5930412G12Rik	h1.naive_gene.v2.1_2625.0_chr12	FZD10-AS1	352396	0.14	0.28	0.069	0.058	1,2,	1,2,	0.0	3	divergent	divergent
TCONS_00175146	Unannotated	uc003gnf.3	MGC4836	182293	0.00	0.58	NA	0.087	NA	NA	0.0	1	intergenic	sno_host
TCONS_00175147	Unannotated	uc003gnf.3	MGC4836	182293	0.00	0.58	NA	0.085	NA	NA	0.0	2	intergenic	sno_host
TCONS_00175144	Unannotated	uc003gnf.3	MGC4836	182293	0.00	0.57	NA	0.080	NA	NA	0.0	4	intergenic	sno_host
TCONS_00175145	Unannotated	uc003gnf.3	MGC4836	182293	0.00	0.58	NA	0.085	NA	NA	0.0	2	intergenic	sno_host
TCONS_00175142	Unannotated	uc003gnf.3	MGC4836	141813	0.00	0.56	NA	0.075	NA	NA	0.0	2	intergenic	sno_host
TCONS_00175143	Unannotated	uc003gnf.3	MGC4836	141518	0.00	0.56	NA	0.079	NA	NA	0.0	4	intergenic	sno_host
TCONS_00168551	Unannotated	uc003hcu.1	BC039452	684048	0.69	0.70	0.065	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00168550	AK046304	uc003hcu.1	BC039452	709995	0.69	0.69	0.045	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00175148	Unannotated	uc003gnf.3	MGC4836	182293	0.00	0.58	NA	0.084	NA	NA	0.0	2	intergenic	sno_host
TCONS_00175149	Unannotated	uc003gnf.3	MGC4836	116985	0.00	0.61	NA	0.040	NA	NA	0.0	2	intergenic	sno_host
TCONS_00166298	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115621	0.02	0.10	0.059	0.064	1,2,	2,3,	0.0	2	divergent	divergent
TCONS_00177934	AK087393	uc010von.1	LINC00917	20414	0.00	0.02	NA	0.096	NA	NA	0.0	3	intergenic	intergenic
TCONS_00177937	Miat	uc003adb.2	MIAT	347735	0.65	0.66	0.059	0.064	1,4,5,6,7,	1,2,3,4,5,	2.5	4	intergenic	intergenic
TCONS_00177936	Miat	uc003adb.2	MIAT	347735	0.65	0.66	0.059	0.064	1,4,5,6,7,	1,2,3,4,5,	2.5	4	intergenic	intergenic
TCONS_00166291	2900005J15Rik	uc003wko.2	PRKAG2-AS1	115683	0.03	0.11	0.063	0.058	1,2,	2,3,	0.0	1	divergent	divergent
TCONS_00177933	AK087393	uc010chr.2	LINC00917	20414	0.05	0.03	0.076	0.071	4,	2,	0.0	4	intergenic	intergenic
TCONS_00177932	AK087393	uc010chr.2	LINC00917	20414	0.04	0.03	0.076	0.071	4,	2,	0.0	4	intergenic	intergenic
TCONS_00172394	Unannotated	h1.naive_gene.v2.1_1480.0_chr7	AK090593	54701	0.02	0.05	0.071	0.079	1,	1,	0.0	2	divergent	divergent
TCONS_00179909	2010001M06Rik	uc011kez.1	LINC00035	140480	0.48	0.57	0.010	0.066	1,2,3,4,	1,2,3,4,	2.5	3	intergenic	intergenic
TCONS_00166331	Unannotated	gene.v2.1_1000.0_chr7_2.205.ADD	Unannotated	41636	0.39	0.55	0.078	NA	1,	1,2,	0.0	0	divergent	divergent
TCONS_00165914	Unannotated	uc003uhk.1	AY927633	140967	0.02	0.10	0.012	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00165915	Unannotated	uc003uhk.1	AY927633	169286	0.03	0.07	0.063	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00167189	Unannotated	uc003ggh.3	NOP14-AS1	290882	0.57	0.58	0.090	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00168520	Unannotated	uc003hco.3	LOC255130	138701	0.00	0.59	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00170300	Unannotated	uc001tyk.2	DYNLL1-AS1	92637	0.48	0.58	0.053	0.000	1,	2,	0.0	0	intergenic	intergenic
TCONS_00177373	Unannotated	h1.naive_gene.v2.1_3382.0_chr1	Unannotated	1015108	0.62	0.78	0.006	0.040	2,	2,	0.5	1	intergenic	intergenic
TCONS_00175150	Gm7854	uc010idu.1	LOC441009	396312	0.00	0.07	NA	0.074	NA	NA	0.0	4	intergenic	intergenic
TCONS_00166030	Unannotated	uc003vci.3	BC061919	62325	0.00	0.67	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00166031	Unannotated	uc003vci.3	BC061919	24580	0.04	0.40	0.059	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00173544	AK046351	uc022ags.1	MAGI2-AS3	59486	0.14	0.40	0.075	0.077	4,	4,5,	0.0	3	divergent	divergent
TCONS_00173545	AK046351	uc022ags.1	MAGI2-AS3	59486	0.14	0.40	0.075	0.077	3,	4,5,	0.0	2	divergent	divergent