#lnc	lncGeneSymbol	ortholog	orthologGeneSymbol	alignScore	exonID	locusID	indelRate(exon)	indelRate(intron)	lncExonsAligned	orthExonsAligned	spliceConserved	spliceTotal	category(mm9)	category(hg19)
TCONS_00126572	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.46	0.58	0.071	0.064	2,4,	2,4,	0.5	3	intergenic	intergenic
TCONS_00126571	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.21	0.57	0.079	0.081	2,	2,3,4,	0.0	1	intergenic	intergenic
TCONS_00126570	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.42	0.58	0.071	0.064	2,3,	2,4,	0.0	2	intergenic	intergenic
TCONS_00136173	0610008F07Rik	uc002xlx.3	BC071794	404265	0.28	0.17	0.041	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00136170	0610008F07Rik	uc002xlx.3	BC071794	404265	0.02	0.14	0.044	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00136171	0610008F07Rik	uc002xlx.3	BC071794	404265	0.04	0.14	0.043	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00136176	0610008F07Rik	uc002xlx.3	BC071794	404265	0.15	0.20	0.044	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00136177	0610008F07Rik	uc002xlx.3	BC071794	404265	0.18	0.20	0.044	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00136175	0610008F07Rik	uc002xlx.3	BC071794	404265	0.20	0.20	0.044	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00136178	0610008F07Rik	uc002xlx.3	BC071794	404265	0.24	0.20	0.043	0.063	1,	1,	0.5	2	intergenic	intergenic
TCONS_00136179	0610008F07Rik	uc002xlx.3	BC071794	404265	0.18	0.20	0.037	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00136180	0610008F07Rik	uc002xlx.3	BC071794	404265	0.29	0.21	0.044	0.063	1,	1,	0.5	3	intergenic	intergenic
TCONS_00137672	Unannotated	uc002woe.1	AY927515	261842	0.06	0.06	0.070	NA	1,	1,	0.0	0	divergent	intergenic
TCONS_00135951	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135950	9430008C03Rik	uc002xis.1	SNHG11	37794	0.20	0.29	0.085	0.073	1,2,3,5,	1,3,	0.0	2	sno_host	sno_host
TCONS_00135953	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135952	9430008C03Rik	uc002xie.3	SNHG17	46351	0.26	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135955	9430008C03Rik	uc002xie.3	SNHG17	46351	0.24	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135954	9430008C03Rik	uc002xie.3	SNHG17	46351	0.23	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00122823	AK083230	uc001zjx.1	BC039545	57874	0.00	0.30	NA	0.066	NA	NA	0.0	2	intergenic	intergenic
TCONS_00135956	9430008C03Rik	uc002xie.3	SNHG17	46351	0.26	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00136006	9430008C03Rik	uc002xie.3	SNHG17	46351	0.24	0.09	0.084	NA	6,	1,	0.0	3	sno_host	sno_host
TCONS_00136007	9430008C03Rik	uc002xis.1	SNHG11	37794	0.56	0.49	0.080	0.071	1,2,3,	1,	0.0	2	sno_host	sno_host
TCONS_00136004	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.07	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00136005	9430008C03Rik	uc002xie.3	SNHG17	46351	0.23	0.09	0.084	NA	6,	1,	0.0	3	sno_host	sno_host
TCONS_00136002	9430008C03Rik	uc002xie.3	SNHG17	46351	0.18	0.07	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00136003	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.07	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00136000	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.07	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00136001	9430008C03Rik	uc002xie.3	SNHG17	46351	0.28	0.07	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00121327	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.18	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121326	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.18	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121325	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.25	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121324	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.25	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121323	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.25	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121322	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.25	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121321	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.25	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121320	Unannotated	uc002uiw.3	BC046497	70301	0.46	0.52	0.083	0.079	2,3,	4,	0.0	3	intergenic	intergenic
TCONS_00131864	Unannotated	uc001nku.1	MIR130A	125485	0.89	0.91	0.016	NA	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00131861	Unannotated	uc001nku.1	MIR130A	125485	0.01	0.01	0.011	NA	2,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00131860	Unannotated	uc001nkt.1	AK096335	166049	0.61	0.61	0.067	NA	1,	2,	0.0	0	divergent	mir_host_intron
TCONS_00131863	Unannotated	uc001nku.1	MIR130A	125485	0.01	0.01	0.011	NA	2,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00131862	Unannotated	h1.ips_gene.v2.1_2569.0_chr11	AK096335	461654	0.06	0.71	0.007	0.042	1,	1,	0.5	1	mir_host_exon	mir_host_intron
TCONS_00133637	Unannotated	h1.oct4_gene.v2.1_2896.0_chr15	EIF3J-AS1	63168	0.23	0.34	0.081	NA	1,	2,3,	0.0	0	intergenic	divergent
TCONS_00133634	Unannotated	uc001ztu.3	EIF3J-AS1	179771	0.68	0.03	0.056	0.073	1,	1,	0.5	1	intergenic	divergent
TCONS_00131709	Unannotated	uc031rqk.1	SChLAP1	108736	0.00	0.58	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00133180	Unannotated	h1.oct4_gene.v2.1_1761.0_chr15	RAD51-AS1	72887	0.25	0.04	0.058	0.000	1,2,	2,	0.0	1	intergenic	divergent
TCONS_00132580	Unannotated	uc021qgk.1	MIR670	702099	0.86	0.86	0.000	NA	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00122325	Unannotated	uc001mxu.2	LOC100507300	211434	0.08	0.53	0.077	0.083	1,	4,	0.0	3	intergenic	intergenic
TCONS_00124199	Unannotated	uc002wjr.3	BC042140	41067	0.33	0.54	0.085	0.000	1,	4,	0.0	0	intergenic	intergenic
TCONS_00133179	Unannotated	h1.oct4_gene.v2.1_1761.0_chr15	RAD51-AS1	72887	0.18	0.04	0.060	0.000	1,2,	2,	0.0	1	intergenic	divergent
TCONS_00124649	AK031463	uc002wrm.1	BC090059	99442	0.03	0.08	0.039	0.079	2,	1,	0.5	1	intergenic	intergenic
TCONS_00127386	Uckl1os	uc011abp.1	UCKL1-AS1	304719	0.62	0.60	0.073	NA	1,2,	1,2,	0.0	1	intergenic	intergenic
TCONS_00134980	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.40	0.050	0.080	6,	2,	0.0	3	intergenic	intergenic
TCONS_00134983	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.028	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00134989	Unannotated	uc021tel.1	LOC23117	12360	0.00	0.24	NA	0.081	NA	NA	0.0	3	intergenic	sno_host
TCONS_00135995	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135994	9430008C03Rik	uc002xis.1	SNHG11	30548	0.21	0.28	0.081	0.073	4,5,6,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135997	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135996	9430008C03Rik	uc002xis.1	SNHG11	37794	0.17	0.28	0.085	0.080	2,3,4,5,	1,3,	0.0	2	sno_host	sno_host
TCONS_00135991	9430008C03Rik	uc002xie.3	SNHG17	46351	0.23	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135990	9430008C03Rik	uc002xis.1	SNHG11	30548	0.26	0.28	0.080	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135993	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135992	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135999	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.07	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135998	9430008C03Rik	uc002xie.3	SNHG17	46351	0.28	0.07	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00120359	Unannotated	uc031rpo.1	TEX41	828042	0.00	0.67	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00121406	Unannotated	h1.naive_gene.v2.1_3345.0_chr2	Unannotated	17230	0.00	0.00	NA	NA	NA	NA	0.0	3	intergenic	sno_host
TCONS_00121407	Unannotated	h1.naive_gene.v2.1_3345.0_chr2	Unannotated	17230	0.00	0.00	NA	NA	NA	NA	0.0	2	intergenic	sno_host
TCONS_00120358	Unannotated	uc031rpo.1	TEX41	842835	0.00	0.73	NA	0.125	NA	NA	0.0	0	intergenic	intergenic
TCONS_00121408	Unannotated	h1.naive_gene.v2.1_3345.0_chr2	Unannotated	17230	0.00	0.00	NA	NA	NA	NA	0.0	2	intergenic	sno_host
TCONS_00131529	Unannotated	h1.naive_gene.v2.1_3345.0_chr2	Unannotated	167957	0.01	0.61	0.064	0.000	1,	2,	0.0	0	intergenic	sno_host
TCONS_00135928	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135929	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135920	9430008C03Rik	uc002xie.3	SNHG17	46351	0.25	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135921	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135922	9430008C03Rik	uc002xie.3	SNHG17	46351	0.31	0.12	0.085	1.000	4,	1,	0.0	3	sno_host	sno_host
TCONS_00135923	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135924	9430008C03Rik	uc002xis.1	SNHG11	30548	0.23	0.29	0.079	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135925	9430008C03Rik	uc002xis.1	SNHG11	30548	0.25	0.29	0.079	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135926	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135927	9430008C03Rik	uc002xis.1	SNHG11	30548	0.22	0.29	0.080	0.073	4,5,6,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00121319	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.18	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00122824	Unannotated	uc001zjx.1	BC039545	174082	0.00	0.71	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00124290	Unannotated	uc002wkq.3	LOC728228	70198	0.42	0.58	0.067	1.000	1,	2,3,	0.0	0	intergenic	intergenic
TCONS_00127803	Unannotated	uc021pms.1	LOC399715	58469	0.00	0.16	NA	0.079	NA	NA	0.0	2	intergenic	intergenic
TCONS_00135957	9430008C03Rik	uc002xis.1	SNHG11	30548	0.22	0.28	0.080	0.073	4,5,6,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135090	Unannotated	uc021wbi.1	LINC00656	81197	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135092	Unannotated	uc021wbi.1	LINC00656	95453	0.00	0.68	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135093	Unannotated	uc021wbi.1	LINC00656	95453	0.10	0.56	0.097	1.000	1,	1,	0.0	0	intergenic	intergenic
TCONS_00135959	9430008C03Rik	uc002xie.3	SNHG17	46351	0.19	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135985	9430008C03Rik	uc002xie.3	SNHG17	46351	0.24	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135958	9430008C03Rik	uc002xis.1	SNHG11	30548	0.21	0.28	0.079	0.073	3,4,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00124686	AK031463	uc002wrm.1	BC090059	99442	0.04	0.08	0.039	0.079	3,	1,	0.5	1	intergenic	intergenic
TCONS_00118446	Unannotated	uc002tji.1	AK123617	569205	0.69	0.69	0.060	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00118447	Unannotated	uc002tji.1	AK123617	580586	0.69	0.69	0.079	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00135025	Unannotated	uc010zsp.2	LINC00261	1084521	0.02	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135024	Unannotated	uc010zsp.2	LINC00261	1084203	0.05	0.12	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135027	Unannotated	uc010zsp.2	LINC00261	1084703	0.05	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135026	Unannotated	uc010zsp.2	LINC00261	1084521	0.05	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135021	Unannotated	uc010zsp.2	LINC00261	1084203	0.05	0.12	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135020	Unannotated	uc010zsp.2	LINC00261	1084143	0.04	0.12	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135023	Unannotated	uc010zsp.2	LINC00261	1084203	0.05	0.12	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135022	Unannotated	uc010zsp.2	LINC00261	1084203	0.05	0.12	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135029	Unannotated	uc010zsp.2	LINC00261	1085258	0.06	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135028	Unannotated	uc010zsp.2	LINC00261	1085258	0.03	0.12	0.023	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135891	AK008166	uc021wdk.1	Metazoa_SRP	189503	0.00	0.01	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00124676	AK031463	uc002wrm.1	BC090059	85707	0.09	0.02	0.039	0.052	2,	1,	0.5	1	intergenic	intergenic
TCONS_00135968	9430008C03Rik	uc002xie.3	SNHG17	46351	0.28	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135969	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	8,	1,	0.0	3	sno_host	sno_host
TCONS_00135964	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135965	9430008C03Rik	uc002xie.3	SNHG17	46351	0.23	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135966	9430008C03Rik	uc002xie.3	SNHG17	46351	0.20	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135967	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135960	9430008C03Rik	uc002xie.3	SNHG17	46351	0.18	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135961	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135962	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135963	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00121329	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.18	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00136068	Unannotated	uc002xjn.1	BC035080	332091	0.03	0.58	0.059	0.000	1,	4,	0.0	0	intergenic	intergenic
TCONS_00121328	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.18	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00131859	Unannotated	h1.ips_gene.v2.1_2569.0_chr11	AK096335	425236	0.58	0.58	0.080	NA	1,	2,	0.0	0	intergenic	mir_host_intron
TCONS_00121456	Unannotated	uc002ump.2	TTN-AS1	905973	0.12	0.40	0.079	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00130662	Unannotated	uc010zqq.2	PRNT	48572	0.00	0.59	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00131712	Unannotated	uc031rqk.1	SChLAP1	177348	0.00	0.53	NA	0.077	NA	NA	0.0	2	intergenic	intergenic
TCONS_00131711	Unannotated	uc031rqk.1	SChLAP1	177348	0.00	0.54	NA	0.078	NA	NA	0.0	2	intergenic	intergenic
TCONS_00131241	Unannotated	uc002ugf.1	AK023515	73577	0.00	0.20	NA	0.078	NA	NA	0.0	2	divergent	divergent
TCONS_00130446	Unannotated	uc003tau.3	DKFZP586I1420	44193	0.00	0.02	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00122330	Unannotated	uc031pzv.1	JA715139	992989	0.31	0.34	0.000	NA	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00134611	Unannotated	uc002wnn.2	SNAP25-AS1	375312	0.00	0.66	NA	0.000	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00128863	Snora17	uc011meb.2	SNHG7	58155	0.27	0.43	0.086	NA	1,2,	1,2,	0.0	1	sno_host	sno_host
TCONS_00128862	Snora17	uc011meb.2	SNHG7	144201	0.31	0.39	0.082	0.078	1,2,	1,2,	0.5	1	sno_host	sno_host
TCONS_00128861	Snora17	uc011meb.2	SNHG7	58155	0.34	0.43	0.074	0.078	3,	2,	0.0	1	sno_host	sno_host
TCONS_00128860	Snora17	uc004cim.2	SNHG7	102582	0.42	0.58	0.074	0.084	3,	6,	0.0	2	sno_host	sno_host
TCONS_00128866	Snora17	uc011meb.2	SNHG7	144201	0.86	0.87	0.007	NA	1,	2,	0.0	0	sno_host	sno_host
TCONS_00128865	Snora17	uc011meb.2	SNHG7	58155	0.79	0.80	0.021	NA	1,	2,	0.0	0	sno_host	sno_host
TCONS_00128864	Snora17	uc011meb.2	SNHG7	58155	0.43	0.52	0.081	0.078	3,4,	2,	0.0	1	sno_host	sno_host
TCONS_00117770	4930412O13Rik	uc010qbe.1	GATA3-AS1	1037127	0.10	0.20	0.037	0.025	1,2,3,	3,4,	0.5	3	intergenic	intergenic
TCONS_00119490	Unannotated	uc004bya.1	BC037833	127721	0.01	0.27	0.068	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00119491	Unannotated	uc004bya.1	BC037833	131286	0.08	0.37	0.077	0.075	2,	4,	0.0	1	intergenic	intergenic
TCONS_00126559	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.07	0.44	0.071	0.067	2,4,	2,4,	0.5	3	intergenic	intergenic
TCONS_00126558	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.06	0.30	0.076	0.080	2,4,	2,4,	0.0	3	intergenic	intergenic
TCONS_00122822	AK083230	uc001zjx.1	BC039545	57874	0.00	0.30	NA	0.066	NA	NA	0.0	2	intergenic	intergenic
TCONS_00126551	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.09	0.44	0.071	0.063	2,3,	2,4,	0.5	2	intergenic	intergenic
TCONS_00123073	1700020I14Rik	h1.naive_gene.v2.1_1259.0_chr15	OIP5-AS1	42868	0.56	0.54	0.078	NA	1,2,3,	4,	0.0	2	intergenic	intergenic
TCONS_00126552	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.09	0.30	0.079	0.081	2,3,	2,3,4,	0.0	2	intergenic	intergenic
TCONS_00126555	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.07	0.44	0.073	0.065	2,4,5,	2,4,	0.5	3	intergenic	intergenic
TCONS_00123074	1700020I14Rik	h1.naive_gene.v2.1_1259.0_chr15	OIP5-AS1	42868	0.56	0.54	0.079	NA	1,2,3,	4,	0.0	2	intergenic	intergenic
TCONS_00126557	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.08	0.44	0.071	0.064	3,5,	2,4,	0.5	3	intergenic	intergenic
TCONS_00126556	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.06	0.30	0.076	0.080	3,5,	2,4,	0.0	3	intergenic	intergenic
TCONS_00123648	Unannotated	h1.ips_gene.v2.1_1664.0_chr15	MIR4712	30080	0.30	0.23	0.079	NA	1,	1,	0.0	0	intergenic	mir_host_exon
TCONS_00123649	Unannotated	h1.ips_gene.v2.1_1664.0_chr15	MIR4712	30080	0.23	0.23	0.078	NA	1,	1,	0.0	0	intergenic	mir_host_exon
TCONS_00120855	Gm13629	uc002udp.3	BC051759	338942	0.12	0.30	0.000	0.074	2,	4,	1.0	3	intergenic	intergenic
TCONS_00123647	Unannotated	h1.ips_gene.v2.1_1664.0_chr15	MIR4712	30080	0.23	0.23	0.078	NA	1,	1,	0.0	0	intergenic	mir_host_exon
TCONS_00121410	Unannotated	h1.naive_gene.v2.1_3345.0_chr2	Unannotated	17230	0.00	0.00	NA	NA	NA	NA	0.0	1	intergenic	sno_host
TCONS_00121413	Unannotated	h1.naive_gene.v2.1_3345.0_chr2	Unannotated	17230	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	sno_host
TCONS_00121412	Unannotated	h1.naive_gene.v2.1_3345.0_chr2	Unannotated	17230	0.00	0.00	NA	NA	NA	NA	0.0	3	intergenic	sno_host
TCONS_00130748	AK017239	uc002uab.1	AK126351	40624	0.00	0.60	NA	0.077	NA	NA	0.0	2	intergenic	intergenic
TCONS_00122486	Unannotated	uc021vlc.1	LOC442028	15343	0.00	0.04	NA	0.085	NA	NA	0.0	1	intergenic	intergenic
TCONS_00123483	Unannotated	uc001zvi.1	AK056686	165855	0.00	0.63	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00126097	Unannotated	uc021wee.1	Metazoa_SRP	76314	0.03	0.03	0.075	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00135937	9430008C03Rik	uc002xie.3	SNHG17	46351	0.25	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135936	9430008C03Rik	uc002xie.3	SNHG17	46351	0.25	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135935	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135934	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135933	9430008C03Rik	uc002xie.3	SNHG17	46351	0.26	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135932	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135931	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135930	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00120368	U09772	uc021vqo.1	VIS1	548500	0.06	0.05	0.010	NA	2,	1,	0.0	0	intergenic	intergenic
TCONS_00120369	Unannotated	uc031rpo.1	TEX41	103597	0.00	0.79	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135939	9430008C03Rik	uc002xie.3	SNHG17	46351	0.19	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135938	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	8,	1,	0.0	3	sno_host	sno_host
TCONS_00134086	Unannotated	uc002the.2	LOC541471	22755	0.00	0.59	NA	0.250	NA	NA	0.0	0	intergenic	mir_host_intron
TCONS_00134088	Gm14005	h1.naive_gene.v2.1_2933.0_chr2	LOC541471	208717	0.07	0.17	0.022	0.076	1,	1,	0.5	2	intergenic	mir_host_intron
TCONS_00134089	Gm14005	h1.naive_gene.v2.1_2933.0_chr2	LOC541471	208717	0.06	0.17	0.022	0.076	1,	1,	0.5	2	intergenic	mir_host_intron
TCONS_00120522	Unannotated	uc021vrj.1	TRNA_Ala	157400	0.00	0.01	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00124289	Unannotated	uc002wkq.3	LOC728228	69414	0.00	0.70	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00118682	Unannotated	uc004cjg.1	KIAA1984-AS1	96692	0.36	0.59	0.076	0.000	1,	2,3,	0.0	0	intergenic	intergenic
TCONS_00132943	AK006310	h1.oct4_gene.v2.1_3037.0_chr11	Unannotated	9557	0.00	0.00	NA	NA	NA	NA	0.0	1	intergenic	intergenic
TCONS_00124817	Nkx2-2as	uc021wbg.1	Nkx2_2as	107804	0.10	0.00	0.000	NA	5,	1,	0.0	0	intergenic	intergenic
TCONS_00132941	Unannotated	uc009yjb.3	BDNF-AS	255907	0.00	0.64	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00134970	Unannotated	uc010zsn.1	LOC284788	153802	0.01	0.33	0.024	0.062	3,	2,	0.0	2	intergenic	intergenic
TCONS_00134971	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.080	3,6,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134972	Unannotated	uc010zsn.1	LOC284788	153802	0.01	0.33	0.024	0.062	4,	2,	0.0	3	intergenic	intergenic
TCONS_00134973	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.081	2,5,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134974	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.050	0.080	6,	2,	0.0	3	intergenic	intergenic
TCONS_00134975	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.050	0.081	5,	2,	0.0	3	intergenic	intergenic
TCONS_00134976	Unannotated	uc010zsn.1	LOC284788	153802	0.01	0.33	0.024	0.065	5,	2,	0.0	3	intergenic	intergenic
TCONS_00134977	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.081	3,6,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134978	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.081	3,5,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134979	Unannotated	uc010zsn.1	LOC284788	153802	0.01	0.33	0.024	0.062	4,	2,	0.0	3	intergenic	intergenic
TCONS_00135010	Unannotated	uc010zsp.2	LINC00261	1084037	0.03	0.12	0.012	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135011	Unannotated	uc010zsp.2	LINC00261	1084037	0.03	0.12	0.028	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135012	Unannotated	uc010zsp.2	LINC00261	1084037	0.05	0.12	0.028	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135013	Unannotated	uc010zsp.2	LINC00261	1084037	0.05	0.12	0.028	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135014	Unannotated	uc010zsp.2	LINC00261	1084037	0.05	0.12	0.028	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135015	Unannotated	uc010zsp.2	LINC00261	1084037	0.02	0.12	0.028	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135016	Unannotated	uc010zsp.2	LINC00261	1084037	0.04	0.12	0.010	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135017	Unannotated	uc010zsp.2	LINC00261	1084037	0.04	0.12	0.010	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135018	Unannotated	uc010zsp.2	LINC00261	1084037	0.04	0.12	0.010	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135019	Unannotated	uc010zsp.2	LINC00261	1084037	0.04	0.12	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00128859	Snora17	uc011meb.2	SNHG7	58155	0.40	0.45	0.079	NA	1,	2,	0.0	0	sno_host	sno_host
TCONS_00135948	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00126965	Unannotated	uc010gjw.3	LOC284757	55348	0.00	0.60	NA	0.078	NA	NA	0.0	1	intergenic	mir_host_intron
TCONS_00133050	Unannotated	h1.ips_gene.v2.1_3070.0_chr15	LOC145845	1204571	0.84	0.84	0.023	NA	1,	1,	0.0	0	intergenic	intergenic
TCONS_00133051	Unannotated	uc001zji.2	LOC145845	1249293	0.00	0.80	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00120370	Unannotated	uc031rpo.1	TEX41	74810	0.00	0.63	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135979	9430008C03Rik	uc002xis.1	SNHG11	37794	0.21	0.29	0.085	0.071	1,2,3,4,	1,3,	0.0	2	sno_host	sno_host
TCONS_00135978	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135973	9430008C03Rik	uc002xie.3	SNHG17	46351	0.26	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135972	9430008C03Rik	uc002xie.3	SNHG17	46351	0.20	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135971	9430008C03Rik	uc002xie.3	SNHG17	46351	0.25	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135970	9430008C03Rik	uc002xie.3	SNHG17	46351	0.25	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135977	9430008C03Rik	uc002xis.1	SNHG11	30548	0.26	0.28	0.079	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135976	9430008C03Rik	uc002xis.1	SNHG11	37794	0.19	0.29	0.084	0.067	1,2,3,4,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135975	9430008C03Rik	uc002xie.3	SNHG17	46351	0.23	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00135974	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00121468	Unannotated	uc031rqk.1	SChLAP1	41089	0.00	0.55	NA	0.081	NA	NA	0.0	2	intergenic	intergenic
TCONS_00121469	Unannotated	uc031rqk.1	SChLAP1	131982	0.00	0.62	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00121463	Unannotated	uc031rqf.1	SChLAP1	41089	0.02	0.55	0.088	0.000	1,	3,4,	0.0	0	intergenic	intergenic
TCONS_00121464	Unannotated	uc031rqj.1	SChLAP1	41089	0.01	0.55	0.096	0.072	2,	3,	0.0	1	intergenic	intergenic
TCONS_00121465	Unannotated	uc031rqj.1	SChLAP1	41089	0.02	0.55	0.096	0.078	3,	3,	0.0	2	intergenic	intergenic
TCONS_00121466	Unannotated	uc031rqk.1	SChLAP1	149552	0.00	0.51	NA	0.076	NA	NA	0.0	1	intergenic	intergenic
TCONS_00121467	Unannotated	uc031rqk.1	SChLAP1	41089	0.00	0.55	NA	0.081	NA	NA	0.0	1	intergenic	intergenic
TCONS_00121330	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.18	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121331	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.09	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00124714	AK031463	uc002wrm.1	BC090059	99442	0.04	0.12	0.039	0.079	2,	1,	0.5	1	intergenic	intergenic
TCONS_00121332	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.25	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00121333	Unannotated	uc002uiw.3	BC046497	70301	0.01	0.25	0.075	0.079	2,	4,	0.0	3	intergenic	intergenic
TCONS_00132578	Unannotated	uc001mxo.1	MIR129-2	992989	0.96	0.96	0.000	NA	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00132579	AK140370	uc021qgk.1	MIR670	46063	0.11	0.01	0.067	NA	2,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00134059	1500011K16Rik	uc002tfq.2	LINC00116	43912	0.34	0.52	0.023	0.055	1,2,	7,8,	0.5	1	intergenic	intergenic
TCONS_00134058	1500011K16Rik	uc002tfq.2	LINC00116	43912	0.11	0.20	0.023	0.055	1,2,	7,8,	0.5	1	intergenic	intergenic
TCONS_00126553	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.05	0.30	0.077	0.080	2,	4,	0.0	1	intergenic	intergenic
TCONS_00127387	Uckl1os	uc011abp.1	UCKL1-AS1	172091	0.48	0.31	0.077	0.065	1,2,	1,	0.0	1	intergenic	intergenic
TCONS_00126554	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.06	0.30	0.077	0.080	2,	4,	0.0	1	intergenic	intergenic
TCONS_00132881	AI314831	uc010rec.2	WT1-AS	686538	0.02	0.06	0.037	0.060	1,	1,	0.5	1	divergent	divergent
TCONS_00135054	Unannotated	uc010zsp.2	LINC00261	595864	0.75	0.75	0.042	NA	1,	4,	0.0	0	intergenic	intergenic
TCONS_00135055	Unannotated	uc010zsp.2	LINC00261	1073963	0.33	0.62	0.022	0.050	3,4,	2,4,	1.0	3	intergenic	intergenic
TCONS_00135056	Unannotated	uc010zsp.2	LINC00261	1080924	0.19	0.65	0.015	0.052	1,	1,	0.5	2	intergenic	intergenic
TCONS_00135057	Unannotated	uc010zsp.2	LINC00261	934960	0.00	0.57	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135050	Unannotated	uc010zsp.2	LINC00261	1084203	0.10	0.32	0.025	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135053	Unannotated	uc010zsp.2	LINC00261	1085391	0.03	0.37	0.008	0.050	1,	1,	0.5	1	intergenic	intergenic
TCONS_00127385	Uckl1os	uc011abp.1	UCKL1-AS1	172091	0.27	0.28	0.065	0.094	2,	1,	0.0	1	intergenic	intergenic
TCONS_00133157	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.04	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00133156	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.04	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00133155	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.03	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00133154	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.03	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00133159	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.04	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00133158	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.04	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00128159	Unannotated	uc002tji.1	AK123617	11710	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	intergenic
TCONS_00128158	Unannotated	uc002tji.1	AK123617	12034	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	intergenic
TCONS_00118869	BC094334	uc004ceu.3	LINC00094	182729	0.60	0.60	0.091	NA	1,2,	3,	0.0	1	intergenic	intergenic
TCONS_00126564	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.06	0.30	0.077	0.072	1,2,	2,3,4,	0.0	1	intergenic	intergenic
TCONS_00126565	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.10	0.30	0.076	0.081	3,4,	2,3,4,	0.0	3	intergenic	intergenic
TCONS_00126566	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.05	0.30	0.076	0.077	1,2,	2,4,	0.0	1	intergenic	intergenic
TCONS_00126567	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.05	0.30	0.076	0.076	1,3,	2,4,	0.0	2	intergenic	intergenic
TCONS_00126560	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.08	0.44	0.071	0.065	2,4,	2,4,	0.5	3	intergenic	intergenic
TCONS_00126561	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.07	0.30	0.079	0.065	1,2,	2,3,4,	0.0	1	intergenic	intergenic
TCONS_00126562	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.05	0.44	0.061	0.067	2,3,4,	2,4,	0.5	3	intergenic	intergenic
TCONS_00126563	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.05	0.44	0.064	NA	1,2,	2,3,4,	0.0	1	intergenic	intergenic
TCONS_00136067	Unannotated	uc002xjn.1	BC035080	325749	0.00	0.68	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00126568	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	210339	0.07	0.44	0.072	0.055	1,2,	2,4,	0.5	1	intergenic	intergenic
TCONS_00126569	Unannotated	h1.naive_gene.v2.1_1925.0_chr20	LOC284751	45922	0.06	0.30	0.076	0.080	2,3,	2,4,	0.0	2	intergenic	intergenic
TCONS_00135040	Unannotated	uc010zsp.2	LINC00261	1085391	0.07	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00123651	Unannotated	h1.ips_gene.v2.1_1664.0_chr15	MIR4712	155814	0.56	0.42	0.085	0.000	2,	1,	0.0	0	divergent	mir_host_exon
TCONS_00123650	Unannotated	h1.ips_gene.v2.1_1664.0_chr15	MIR4712	155814	0.54	0.41	0.085	0.000	2,	1,	0.0	0	divergent	mir_host_exon
TCONS_00119487	Unannotated	uc004bya.1	BC037833	131286	0.20	0.36	0.077	0.075	4,	4,	0.0	3	intergenic	intergenic
TCONS_00119486	Unannotated	uc004bxy.2	LOC100506190	211314	0.00	0.67	NA	0.000	NA	NA	0.0	0	mir_host_exon	intergenic
TCONS_00119489	Unannotated	uc004bya.1	BC037833	131286	0.21	0.36	0.077	0.075	4,	4,	0.0	3	intergenic	intergenic
TCONS_00119488	Unannotated	uc004bya.1	BC037833	127721	0.01	0.26	0.068	NA	2,	1,	0.0	1	intergenic	intergenic
TCONS_00135942	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135943	9430008C03Rik	uc002xie.3	SNHG17	46351	0.18	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135940	9430008C03Rik	uc002xis.1	SNHG11	30548	0.21	0.29	0.080	0.073	4,5,6,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135941	9430008C03Rik	uc002xis.1	SNHG11	30548	0.25	0.29	0.079	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135946	9430008C03Rik	uc002xis.1	SNHG11	37794	0.20	0.29	0.085	0.072	1,2,3,5,	1,3,	0.0	2	sno_host	sno_host
TCONS_00135947	9430008C03Rik	uc002xis.1	SNHG11	37794	0.19	0.29	0.084	0.067	1,2,3,4,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135944	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135945	9430008C03Rik	uc002xis.1	SNHG11	37794	0.20	0.29	0.085	0.072	1,2,3,6,	1,3,	0.0	2	sno_host	sno_host
TCONS_00129127	Unannotated	uc004bux.1	MIR219-2	376145	0.98	0.99	0.000	0.000	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00135949	9430008C03Rik	uc002xie.3	SNHG17	46351	0.25	0.12	0.085	1.000	7,	1,	0.0	3	sno_host	sno_host
TCONS_00132208	Unannotated	uc001ndl.3	LRP4-AS1	46050	0.00	0.60	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00134096	Gm14005	uc002thf.4	LOC541471	167959	0.49	0.35	0.054	0.077	3,	2,	0.5	1	intergenic	intergenic
TCONS_00134095	Gm14005	uc002thf.4	LOC541471	167959	0.38	0.35	0.054	0.077	2,	2,	0.5	1	intergenic	intergenic
TCONS_00134094	Gm14005	h1.naive_gene.v2.1_2933.0_chr2	LOC541471	208717	0.33	0.30	0.022	0.076	1,	1,	0.5	1	intergenic	mir_host_intron
TCONS_00134093	Gm14005	h1.naive_gene.v2.1_2933.0_chr2	LOC541471	208717	0.37	0.24	0.022	0.076	1,	1,	0.5	1	intergenic	mir_host_intron
TCONS_00134092	Gm14005	h1.naive_gene.v2.1_2933.0_chr2	LOC541471	208717	0.10	0.20	0.022	0.076	1,	1,	0.5	2	intergenic	mir_host_intron
TCONS_00134091	Gm14005	h1.naive_gene.v2.1_2933.0_chr2	LOC541471	148614	0.06	0.14	0.092	0.079	3,	2,	0.0	3	intergenic	mir_host_intron
TCONS_00134090	Gm14005	h1.naive_gene.v2.1_2933.0_chr2	LOC541471	208717	0.36	0.19	0.022	0.076	1,	1,	0.5	2	intergenic	mir_host_intron
TCONS_00131302	Unannotated	uc002uib.3	MLK7-AS1	65055	0.03	0.53	0.094	0.000	1,	2,	0.0	0	intergenic	intergenic
TCONS_00131303	Unannotated	uc002uib.3	MLK7-AS1	263658	0.00	0.72	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00122783	C130080G10Rik	uc001zit.1	AK092087	678076	0.07	0.58	0.036	0.065	1,	1,	0.0	2	divergent	intergenic
TCONS_00122784	C130080G10Rik	uc001zit.1	AK092087	66245	0.00	0.56	NA	0.081	NA	NA	0.0	2	intergenic	intergenic
TCONS_00122785	C130080G10Rik	uc001zit.1	AK092087	73691	0.11	0.20	0.077	0.076	4,5,	3,	0.0	2	intergenic	intergenic
TCONS_00130391	Unannotated	uc003igy.3	BC040219	107605	0.00	0.07	NA	0.079	NA	NA	0.0	5	intergenic	divergent
TCONS_00130392	Unannotated	uc003igy.3	BC040219	107605	0.00	0.07	NA	0.079	NA	NA	0.0	5	intergenic	divergent
TCONS_00130393	Unannotated	uc003igy.3	BC040219	107605	0.00	0.07	NA	0.079	NA	NA	0.0	4	intergenic	divergent
TCONS_00129464	Unannotated	uc022bnr.1	MIR3960	235493	0.92	0.93	0.000	NA	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00129465	Unannotated	uc022bnr.1	MIR3960	236250	0.82	0.84	0.014	NA	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00134969	Unannotated	uc010zsn.1	LOC284788	153802	0.01	0.33	0.024	0.063	3,	2,	0.0	2	intergenic	intergenic
TCONS_00134968	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.081	2,4,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134967	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.050	0.081	5,	2,	0.0	3	intergenic	intergenic
TCONS_00134966	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.080	2,6,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134965	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.081	2,4,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134964	Unannotated	uc010zsn.1	LOC284788	199524	0.01	0.41	0.079	0.080	2,6,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134963	Unannotated	uc010zsn.1	LOC284788	199491	0.01	0.51	0.065	0.081	1,5,	1,2,	0.0	3	intergenic	intergenic
TCONS_00134962	Unannotated	uc010zsn.1	LOC284788	162562	0.00	0.58	0.024	0.052	2,	2,	0.0	1	intergenic	intergenic
TCONS_00134961	Unannotated	uc010zsn.1	LOC284788	162562	0.00	0.58	0.024	0.071	3,	2,	0.0	2	intergenic	intergenic
TCONS_00134960	Unannotated	uc010zsn.1	LOC284788	162562	0.00	0.58	0.024	0.068	3,	2,	0.0	2	intergenic	intergenic
TCONS_00135009	Unannotated	uc010zsp.2	LINC00261	1084037	0.06	0.12	0.029	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135008	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.012	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135007	Unannotated	uc010zsp.2	LINC00261	1084037	0.03	0.12	0.014	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135006	Unannotated	uc010zsp.2	LINC00261	1084037	0.03	0.12	0.014	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135005	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135004	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135003	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135002	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135001	Unannotated	uc010zsp.2	LINC00261	1084037	0.02	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135000	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00132061	Unannotated	uc003fcw.1	AK097161	37887	0.00	0.56	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00133162	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.04	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00133160	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.04	NA	0.073	NA	NA	0.0	2	intergenic	intergenic
TCONS_00133161	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.04	NA	0.073	NA	NA	0.0	1	intergenic	intergenic
TCONS_00133164	Unannotated	uc002qse.3	A1BG-AS1	5180	0.00	0.52	NA	NA	NA	NA	0.0	0	intergenic	intergenic
TCONS_00120364	Unannotated	uc031rpo.1	TEX41	622426	0.00	0.72	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00119233	Unannotated	uc022boi.1	MIR2964A	376145	0.98	1.00	0.000	NA	1,	1,	0.0	0	mir_host_exon	mir_host_exon
TCONS_00120054	Unannotated	uc004bkq.3	LOC253039	334732	0.30	0.30	0.071	NA	1,	4,	0.0	0	intergenic	divergent
TCONS_00120365	Unannotated	uc031rpo.1	TEX41	42855	0.00	0.70	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00120366	U09772	uc031rpo.1	TEX41	575557	0.00	0.74	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00134992	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.025	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00134993	Unannotated	uc010zsp.2	LINC00261	1084037	0.02	0.12	0.024	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00134990	Unannotated	uc010zsp.2	LINC00261	595714	0.10	0.02	0.012	0.000	1,	4,	0.0	3	intergenic	intergenic
TCONS_00134991	Unannotated	uc010zsp.2	LINC00261	1084037	0.03	0.12	0.041	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00134996	Unannotated	uc010zsp.2	LINC00261	1084037	0.02	0.12	0.017	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00134997	Unannotated	uc010zsp.2	LINC00261	1084037	0.04	0.12	0.032	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00134994	Unannotated	uc010zsp.2	LINC00261	1084037	0.04	0.12	0.034	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00134995	Unannotated	uc010zsp.2	LINC00261	1084037	0.02	0.12	0.019	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00120360	Unannotated	uc031rpo.1	TEX41	811830	0.00	0.74	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00134998	Unannotated	uc010zsp.2	LINC00261	1084037	0.03	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00134999	Unannotated	uc010zsp.2	LINC00261	1084037	0.01	0.12	0.016	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00120361	Unannotated	uc031rpo.1	TEX41	739593	0.00	0.70	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135986	9430008C03Rik	uc002xis.1	SNHG11	30548	0.26	0.28	0.079	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135987	9430008C03Rik	uc002xis.1	SNHG11	30548	0.25	0.28	0.080	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135984	9430008C03Rik	uc002xis.1	SNHG11	30548	0.22	0.28	0.079	0.073	3,4,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00134102	Unannotated	uc022aje.1	DQ601342	7428	0.00	0.00	NA	NA	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135982	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135983	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135980	9430008C03Rik	uc002xie.3	SNHG17	46351	0.21	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135981	9430008C03Rik	uc002xie.3	SNHG17	46351	0.20	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00120363	Unannotated	uc031rpo.1	TEX41	620866	0.00	0.75	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135988	9430008C03Rik	uc002xis.1	SNHG11	30548	0.25	0.28	0.080	0.073	4,5,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00135989	9430008C03Rik	uc002xie.3	SNHG17	46351	0.18	0.12	0.085	1.000	5,	1,	0.0	3	sno_host	sno_host
TCONS_00120367	Unannotated	uc031rpo.1	TEX41	575557	0.00	0.70	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00121470	Unannotated	uc031rqk.1	SChLAP1	224922	0.00	0.60	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00134205	Unannotated	uc010fkq.2	FLJ42351	169463	0.05	0.25	0.086	0.000	1,	1,2,3,	0.0	0	divergent	intergenic
TCONS_00131510	Unannotated	uc002ukl.1	AX747372	1374003	0.40	0.03	0.034	NA	2,	1,	0.0	0	divergent	intergenic
TCONS_00131512	Unannotated	uc021vsq.1	HOXD-AS1	1262131	0.74	0.64	0.037	0.061	2,3,	3,	0.5	2	divergent	divergent
TCONS_00117713	Unannotated	uc001iky.2	PROSER2-AS1	34963	0.00	0.67	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135919	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135918	9430008C03Rik	uc002xie.3	SNHG17	46351	0.22	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135915	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135914	9430008C03Rik	uc002xie.3	SNHG17	46351	0.27	0.13	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135917	9430008C03Rik	uc002xie.3	SNHG17	46351	0.23	0.12	0.085	1.000	6,	1,	0.0	3	sno_host	sno_host
TCONS_00135916	9430008C03Rik	uc002xis.1	SNHG11	30548	0.21	0.29	0.081	0.073	4,5,6,	1,2,3,	0.0	2	sno_host	sno_host
TCONS_00120362	Unannotated	uc031rpo.1	TEX41	677419	0.00	0.55	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00135043	Unannotated	uc010zsp.2	LINC00261	1084037	0.02	0.25	0.035	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135042	Unannotated	uc010zsp.2	LINC00261	1084037	0.11	0.23	0.017	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135041	Unannotated	uc010zsp.2	LINC00261	1084203	0.12	0.15	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00127384	Uckl1os	uc011abp.1	UCKL1-AS1	304719	0.58	0.52	0.070	0.000	2,	1,2,	0.0	1	intergenic	intergenic
TCONS_00135045	Unannotated	uc010zsp.2	LINC00261	1084037	0.02	0.25	0.009	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135044	Unannotated	uc010zsp.2	LINC00261	1084037	0.03	0.25	0.028	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00136851	A630075F10Rik	uc002xwp.1	AK056432	398807	0.00	0.49	NA	0.075	NA	NA	0.0	2	intergenic	intergenic
TCONS_00135049	Unannotated	uc010zsp.2	LINC00261	1084203	0.07	0.32	0.009	0.050	1,	1,	0.5	2	intergenic	intergenic
TCONS_00136855	Unannotated	uc002xwp.1	AK056432	398807	0.00	0.69	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00136854	Unannotated	uc002xwp.1	AK056432	398807	0.00	0.41	NA	1.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00136856	Unannotated	uc002xwp.1	AK056432	398807	0.00	0.75	NA	0.000	NA	NA	0.0	0	intergenic	intergenic
TCONS_00125748	Unannotated	uc002xio.1	SNORA71D	27220	0.00	0.00	NA	NA	NA	NA	0.0	0	sno_host	sno_host
TCONS_00134956	Unannotated	uc010zsn.1	LOC284788	161346	0.01	0.55	0.024	0.074	3,	2,	0.0	2	intergenic	intergenic
TCONS_00134957	Unannotated	uc010zsn.1	LOC284788	162562	0.01	0.58	0.024	0.068	3,	2,	0.0	2	intergenic	intergenic
TCONS_00134954	Unannotated	uc010zso.1	LOC284788	34793	0.04	0.58	0.048	NA	1,	2,	0.0	0	intergenic	intergenic
TCONS_00134955	Unannotated	uc010zso.1	LOC284788	158065	0.00	0.38	NA	0.050	NA	NA	0.0	1	intergenic	intergenic
TCONS_00124694	AK031463	uc002wrm.1	BC090059	85707	0.10	0.02	0.039	0.052	3,	1,	0.5	1	intergenic	intergenic
TCONS_00124698	AK031463	uc002wrm.1	BC090059	99442	0.04	0.08	0.039	0.079	2,	1,	0.5	1	intergenic	intergenic
TCONS_00134958	Unannotated	uc010zsn.1	LOC284788	162562	0.01	0.58	0.024	0.048	4,	2,	0.0	3	intergenic	intergenic
TCONS_00134959	Unannotated	uc010zsn.1	LOC284788	162562	0.01	0.58	0.024	0.052	3,	2,	0.0	2	intergenic	intergenic
TCONS_00135036	Unannotated	uc010zsp.2	LINC00261	1085391	0.06	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135037	Unannotated	uc010zsp.2	LINC00261	1085391	0.07	0.12	0.022	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135034	Unannotated	uc010zsp.2	LINC00261	1085391	0.03	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135035	Unannotated	uc010zsp.2	LINC00261	1085391	0.06	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135032	Unannotated	uc010zsp.2	LINC00261	1085258	0.07	0.12	0.023	0.050	1,3,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135033	Unannotated	uc010zsp.2	LINC00261	1085258	0.07	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135030	Unannotated	uc010zsp.2	LINC00261	1085258	0.07	0.12	0.023	0.050	1,2,	1,2,	1.5	3	intergenic	intergenic
TCONS_00135031	Unannotated	uc010zsp.2	LINC00261	1085258	0.06	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135038	Unannotated	uc010zsp.2	LINC00261	1085391	0.06	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic
TCONS_00135039	Unannotated	uc010zsp.2	LINC00261	1085391	0.07	0.12	0.008	0.050	1,	1,	0.5	3	intergenic	intergenic