FastQCFastQC Report
Mon 24 Jun 2019
SRR8543822_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8543822_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26680950
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT826660.3098315464779178No Hit
CCCCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT380810.1427273016890328No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN276040.10345958446007358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)