Left reads: Input : 24606185 Mapped : 21779289 (88.5% of input) of these: 2041128 ( 9.4%) have multiple alignments (58300 have >20) Right reads: Input : 24606185 Mapped : 21522125 (87.5% of input) of these: 2045223 ( 9.5%) have multiple alignments (58206 have >20) 88.0% overall read mapping rate. Aligned pairs: 21000553 of these: 1981957 ( 9.4%) have multiple alignments 178659 ( 0.9%) are discordant alignments 84.6% concordant pair alignment rate.