46476784 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 46476784 + 0 mapped (100.00%:-nan%) 46476784 + 0 paired in sequencing 23459643 + 0 read1 23017141 + 0 read2 32455204 + 0 properly paired (69.83%:-nan%) 45283978 + 0 with itself and mate mapped 1192806 + 0 singletons (2.57%:-nan%) 502976 + 0 with mate mapped to a different chr 294350 + 0 with mate mapped to a different chr (mapQ>=5)