Left reads: Input : 29390420 Mapped : 27478000 (93.5% of input) of these: 3189904 (11.6%) have multiple alignments (191222 have >20) Right reads: Input : 29390420 Mapped : 27178948 (92.5% of input) of these: 3191644 (11.7%) have multiple alignments (191118 have >20) 93.0% overall read mapping rate. Aligned pairs: 26623075 of these: 3109288 (11.7%) have multiple alignments 220975 ( 0.8%) are discordant alignments 89.8% concordant pair alignment rate.