41792613 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 41792613 + 0 mapped (100.00%:-nan%) 41792613 + 0 paired in sequencing 21143478 + 0 read1 20649135 + 0 read2 26419156 + 0 properly paired (63.21%:-nan%) 40620864 + 0 with itself and mate mapped 1171749 + 0 singletons (2.80%:-nan%) 224650 + 0 with mate mapped to a different chr 224650 + 0 with mate mapped to a different chr (mapQ>=5)