FastQCFastQC Report
Mon 24 Jun 2019
SRR8450743_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8450743_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22312541
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA428240.1919279386422192No Hit
CCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT402610.18044112501574786No Hit
CCCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT366080.16406916630427706No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)