FastQCFastQC Report
Mon 24 Jun 2019
SRR8450746_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8450746_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18559768
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTC839330.4522308684030964No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT575730.3102032309886632No Hit
CTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCG268440.14463542863251308No Hit
GGAGTCTAACGCGTGCGCGAGTCAGGGGCTCGTCCGAAAGCCGCCGTGGCG226280.12191962744361891No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTA220550.11883230436932185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)