FastQCFastQC Report
Mon 24 Jun 2019
SRR8450746_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8450746_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18559768
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTC193040.10400992081366534No Hit
CCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT190240.10250128126601582No Hit
CTTTTACTTCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCC186970.10073940579429658No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)