Left reads: Input : 20386875 Mapped : 19225564 (94.3% of input) of these: 2433056 (12.7%) have multiple alignments (278182 have >20) Right reads: Input : 20386875 Mapped : 19007261 (93.2% of input) of these: 2442196 (12.8%) have multiple alignments (278164 have >20) 93.8% overall read mapping rate. Aligned pairs: 18384688 of these: 2314227 (12.6%) have multiple alignments 1118691 ( 6.1%) are discordant alignments 84.7% concordant pair alignment rate.