Left reads: Input : 17890753 Mapped : 16825774 (94.0% of input) of these: 2223308 (13.2%) have multiple alignments (330381 have >20) Right reads: Input : 17890753 Mapped : 16753828 (93.6% of input) of these: 2252559 (13.4%) have multiple alignments (330380 have >20) 93.8% overall read mapping rate. Aligned pairs: 16138736 of these: 2125606 (13.2%) have multiple alignments 954404 ( 5.9%) are discordant alignments 84.9% concordant pair alignment rate.