FastQCFastQC Report
Fri 5 Jul 2019
SRR8315053_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8315053_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58696850
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1159770.19758641221803214No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT709480.12087190368818769No Hit
GCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAAC688850.11735723467272946No Hit
CGCTGACCCCCCTTCCCGGGGGGGGATGCGTGCATTTATCAGATCAAAAC625720.10660197267826127No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGAATGTCATCTCGTAT606470.10332240997600382TruSeq Adapter, Index 2 (97% over 36bp)
GTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTCGCGCCCGCCCGC604610.10300552755386362No Hit
GAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG596270.10158466766104143No Hit
CAAATATTCAAACGAGAACTTTGAAGGCCGAAGTGGAGAAGGGTTCCATG592120.10087764505250282No Hit
GTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTC591340.10074475887547629No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)