FastQCFastQC Report
Fri 5 Jul 2019
SRR8315036_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8315036_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76932547
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT6488080.8433465747598348No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2657850.34547796786189855No Hit
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT1876400.24390197298420394No Hit
GAAAATATCATTGACCTATCCAATGCCAATCGCTGCCTCCAGGCCCGAGA1552020.2017377638621532No Hit
CGAGAACCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTATG1419310.1844875875486093No Hit
CCGAGAACCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTAT1219410.15850378644034754No Hit
CAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAAGGATTCCATG838440.1089837828975037No Hit
CCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTATGTGAGGA824170.10712891125260679No Hit
GTTTAGGCTAAGGCGTCTTTGCATCTAGTGACAAGGTTTGGACCCTCAGT813200.10570298679959211No Hit
GGCACATCTCACTTAGCCGCAGGAGCCGGTTTCTCCTCAAGGTTCATTAA808060.10503486905223611No Hit
GGAAGACTGGGCCTGGCACATCTCACTTAGCCGCAGGAGCCGGTTTCTCC804900.10462411962000946No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)