FastQCFastQC Report
Fri 5 Jul 2019
SRR8315043_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8315043_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63390017
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAATTGGACTTCTCAGTGAGACAGGATGGAATGCAGATCACAGAATT1995320.31476880657722495No Hit
GAAAATATCATTGACCTATCCAATGCCAATCGCTGCCTCCAGGCCCGAGA1847770.2914922707782205No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1807330.28511271735421684No Hit
CGAGAACCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTATG1567980.2473544059784682No Hit
CCGAGAACCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTAT1394720.22002202649669586No Hit
CAGCGATTGGCATTGGATAGGTCAATGATATTTTCTCTAAGGATTCCATG1071110.1689714012854737No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA908160.1432654608690198No Hit
CCAGATTTGAGTTCAGACATCAAGGAAAGGTTTGCACAACTATGTGAGGA904110.1426265590053399No Hit
GTGGAGTCCTGGTGAGAAGTCTCCACTCAACACTGGAGGCTCAGGCCATT714920.11278116552642665No Hit
TGAGCCTCCAGTGTTGAGTGGAGACTTCTCACCAGGACTCCACCATCATC713110.11249563160710306No Hit
CGAGAATGAAGAATGGCCTGAGCCTCCAGTGTTGAGTGGAGACTTCTCAC682360.1076447100495335No Hit
GGGAAACCTTCCAGCTGATGGGGCTCTATGGCCGAGAACCAGATTTGAGT634390.10007727241972501No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)