Left reads: Input : 64764068 Mapped : 34937983 (53.9% of input) of these: 921574 ( 2.6%) have multiple alignments (6136 have >20) Right reads: Input : 64764068 Mapped : 31691628 (48.9% of input) of these: 853609 ( 2.7%) have multiple alignments (6135 have >20) 51.4% overall read mapping rate. Aligned pairs: 29955094 of these: 745258 ( 2.5%) have multiple alignments 204902 ( 0.7%) are discordant alignments 45.9% concordant pair alignment rate.