3870546 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 3870546 + 0 mapped (100.00%:-nan%) 3870546 + 0 paired in sequencing 1966399 + 0 read1 1904147 + 0 read2 1741614 + 0 properly paired (45.00%:-nan%) 2211006 + 0 with itself and mate mapped 1659540 + 0 singletons (42.88%:-nan%) 702600 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)