2908143 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 2908143 + 0 mapped (100.00%:-nan%) 2908143 + 0 paired in sequencing 1438286 + 0 read1 1469857 + 0 read2 1310124 + 0 properly paired (45.05%:-nan%) 1611848 + 0 with itself and mate mapped 1296295 + 0 singletons (44.57%:-nan%) 497138 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)