2759705 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 2759705 + 0 mapped (100.00%:-nan%) 2759705 + 0 paired in sequencing 1394132 + 0 read1 1365573 + 0 read2 1088442 + 0 properly paired (39.44%:-nan%) 1360832 + 0 with itself and mate mapped 1398873 + 0 singletons (50.69%:-nan%) 533872 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)