5234977 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 5234977 + 0 mapped (100.00%:-nan%) 5234977 + 0 paired in sequencing 2375236 + 0 read1 2859741 + 0 read2 2827054 + 0 properly paired (54.00%:-nan%) 3207196 + 0 with itself and mate mapped 2027781 + 0 singletons (38.74%:-nan%) 590434 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)