4386340 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 4386340 + 0 mapped (100.00%:-nan%) 4386340 + 0 paired in sequencing 2133719 + 0 read1 2252621 + 0 read2 2874804 + 0 properly paired (65.54%:-nan%) 3272464 + 0 with itself and mate mapped 1113876 + 0 singletons (25.39%:-nan%) 509606 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)