Left reads: Input : 65911546 Mapped : 22875360 (34.7% of input) of these: 1391581 ( 6.1%) have multiple alignments (51581 have >20) Right reads: Input : 65911546 Mapped : 20286094 (30.8% of input) of these: 1249695 ( 6.2%) have multiple alignments (49583 have >20) 32.7% overall read mapping rate. Aligned pairs: 17681829 of these: 959981 ( 5.4%) have multiple alignments 537489 ( 3.0%) are discordant alignments 26.0% concordant pair alignment rate.