40844292 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 40844292 + 0 mapped (100.00%:-nan%) 40844292 + 0 paired in sequencing 21537097 + 0 read1 19307195 + 0 read2 31771142 + 0 properly paired (77.79%:-nan%) 33314350 + 0 with itself and mate mapped 7529942 + 0 singletons (18.44%:-nan%) 1178824 + 0 with mate mapped to a different chr 1178824 + 0 with mate mapped to a different chr (mapQ>=5)