Left reads: Input : 56056615 Mapped : 22329278 (39.8% of input) of these: 792181 ( 3.5%) have multiple alignments (25627 have >20) Right reads: Input : 56056615 Mapped : 20020905 (35.7% of input) of these: 713710 ( 3.6%) have multiple alignments (23032 have >20) 37.8% overall read mapping rate. Aligned pairs: 17119941 of these: 462766 ( 2.7%) have multiple alignments 660957 ( 3.9%) are discordant alignments 29.4% concordant pair alignment rate.