54431992 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 54431992 + 0 mapped (100.00%:-nan%) 54431992 + 0 paired in sequencing 28483749 + 0 read1 25948243 + 0 read2 46733248 + 0 properly paired (85.86%:-nan%) 48015278 + 0 with itself and mate mapped 6416714 + 0 singletons (11.79%:-nan%) 689770 + 0 with mate mapped to a different chr 574944 + 0 with mate mapped to a different chr (mapQ>=5)