Left reads: Input : 65267185 Mapped : 34607436 (53.0% of input) of these: 4169152 (12.0%) have multiple alignments (1011488 have >20) Right reads: Input : 65267185 Mapped : 31196667 (47.8% of input) of these: 3750091 (12.0%) have multiple alignments (933600 have >20) 50.4% overall read mapping rate. Aligned pairs: 28980908 of these: 3476484 (12.0%) have multiple alignments 420712 ( 1.5%) are discordant alignments 43.8% concordant pair alignment rate.