Left reads: Input : 60170161 Mapped : 35662519 (59.3% of input) of these: 3259181 ( 9.1%) have multiple alignments (594316 have >20) Right reads: Input : 60170161 Mapped : 32416817 (53.9% of input) of these: 2943068 ( 9.1%) have multiple alignments (543031 have >20) 56.6% overall read mapping rate. Aligned pairs: 30710872 of these: 2752654 ( 9.0%) have multiple alignments 238267 ( 0.8%) are discordant alignments 50.6% concordant pair alignment rate.