Left reads: Input : 29868177 Mapped : 16697650 (55.9% of input) of these: 1609889 ( 9.6%) have multiple alignments (17764 have >20) Right reads: Input : 29868177 Mapped : 15532443 (52.0% of input) of these: 1493360 ( 9.6%) have multiple alignments (17759 have >20) 54.0% overall read mapping rate. Aligned pairs: 15064200 of these: 1441879 ( 9.6%) have multiple alignments 70540 ( 0.5%) are discordant alignments 50.2% concordant pair alignment rate.