Left reads: Input : 31225712 Mapped : 17390548 (55.7% of input) of these: 1965323 (11.3%) have multiple alignments (24089 have >20) Right reads: Input : 31225712 Mapped : 16194835 (51.9% of input) of these: 1822069 (11.3%) have multiple alignments (24059 have >20) 53.8% overall read mapping rate. Aligned pairs: 15715949 of these: 1757863 (11.2%) have multiple alignments 64516 ( 0.4%) are discordant alignments 50.1% concordant pair alignment rate.