Left reads: Input : 30999879 Mapped : 17887861 (57.7% of input) of these: 2349056 (13.1%) have multiple alignments (30075 have >20) Right reads: Input : 30999879 Mapped : 16639160 (53.7% of input) of these: 2165304 (13.0%) have multiple alignments (30055 have >20) 55.7% overall read mapping rate. Aligned pairs: 16121836 of these: 2085369 (12.9%) have multiple alignments 97732 ( 0.6%) are discordant alignments 51.7% concordant pair alignment rate.