Left reads: Input : 31426279 Mapped : 17606873 (56.0% of input) of these: 2097947 (11.9%) have multiple alignments (24922 have >20) Right reads: Input : 31426279 Mapped : 16345630 (52.0% of input) of these: 1938125 (11.9%) have multiple alignments (24909 have >20) 54.0% overall read mapping rate. Aligned pairs: 15865808 of these: 1869152 (11.8%) have multiple alignments 64637 ( 0.4%) are discordant alignments 50.3% concordant pair alignment rate.