Left reads: Input : 31813557 Mapped : 16663017 (52.4% of input) of these: 1494565 ( 9.0%) have multiple alignments (16372 have >20) Right reads: Input : 31813557 Mapped : 15517086 (48.8% of input) of these: 1386460 ( 8.9%) have multiple alignments (16382 have >20) 50.6% overall read mapping rate. Aligned pairs: 15052293 of these: 1341358 ( 8.9%) have multiple alignments 57386 ( 0.4%) are discordant alignments 47.1% concordant pair alignment rate.