Left reads: Input : 31194702 Mapped : 17102829 (54.8% of input) of these: 2057195 (12.0%) have multiple alignments (25381 have >20) Right reads: Input : 31194702 Mapped : 15885653 (50.9% of input) of these: 1897013 (11.9%) have multiple alignments (25369 have >20) 52.9% overall read mapping rate. Aligned pairs: 15400581 of these: 1826253 (11.9%) have multiple alignments 65880 ( 0.4%) are discordant alignments 49.2% concordant pair alignment rate.