Left reads: Input : 33119767 Mapped : 18438220 (55.7% of input) of these: 1662239 ( 9.0%) have multiple alignments (20882 have >20) Right reads: Input : 33119767 Mapped : 17247421 (52.1% of input) of these: 1550732 ( 9.0%) have multiple alignments (20844 have >20) 53.9% overall read mapping rate. Aligned pairs: 16746896 of these: 1500035 ( 9.0%) have multiple alignments 66892 ( 0.4%) are discordant alignments 50.4% concordant pair alignment rate.