Left reads: Input : 33055939 Mapped : 18100268 (54.8% of input) of these: 1777389 ( 9.8%) have multiple alignments (21364 have >20) Right reads: Input : 33055939 Mapped : 16916584 (51.2% of input) of these: 1657619 ( 9.8%) have multiple alignments (21303 have >20) 53.0% overall read mapping rate. Aligned pairs: 16432913 of these: 1604792 ( 9.8%) have multiple alignments 61082 ( 0.4%) are discordant alignments 49.5% concordant pair alignment rate.