Left reads: Input : 27470320 Mapped : 14562270 (53.0% of input) of these: 1215771 ( 8.3%) have multiple alignments (14984 have >20) Right reads: Input : 27470320 Mapped : 13676672 (49.8% of input) of these: 1138370 ( 8.3%) have multiple alignments (14973 have >20) 51.4% overall read mapping rate. Aligned pairs: 13254564 of these: 1098983 ( 8.3%) have multiple alignments 64244 ( 0.5%) are discordant alignments 48.0% concordant pair alignment rate.