Left reads: Input : 29402681 Mapped : 15272265 (51.9% of input) of these: 1371248 ( 9.0%) have multiple alignments (16159 have >20) Right reads: Input : 29402681 Mapped : 14368559 (48.9% of input) of these: 1288794 ( 9.0%) have multiple alignments (16150 have >20) 50.4% overall read mapping rate. Aligned pairs: 13943615 of these: 1246407 ( 8.9%) have multiple alignments 50154 ( 0.4%) are discordant alignments 47.3% concordant pair alignment rate.