3936927 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 3936927 + 0 mapped (100.00%:-nan%) 3936927 + 0 paired in sequencing 2048741 + 0 read1 1888186 + 0 read2 3199456 + 0 properly paired (81.27%:-nan%) 3654358 + 0 with itself and mate mapped 282569 + 0 singletons (7.18%:-nan%) 458506 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)