Left reads: Input : 29894103 Mapped : 20784211 (69.5% of input) of these: 2740881 (13.2%) have multiple alignments (39304 have >20) Right reads: Input : 29894103 Mapped : 19748998 (66.1% of input) of these: 2599853 (13.2%) have multiple alignments (39289 have >20) 67.8% overall read mapping rate. Aligned pairs: 18876988 of these: 2461410 (13.0%) have multiple alignments 284410 ( 1.5%) are discordant alignments 62.2% concordant pair alignment rate.