54197342 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 54197342 + 0 mapped (100.00%:-nan%) 54197342 + 0 paired in sequencing 27796373 + 0 read1 26400969 + 0 read2 46590832 + 0 properly paired (85.97%:-nan%) 49831320 + 0 with itself and mate mapped 4366022 + 0 singletons (8.06%:-nan%) 1613478 + 0 with mate mapped to a different chr 372152 + 0 with mate mapped to a different chr (mapQ>=5)