5370329 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 duplicates 5370329 + 0 mapped (100.00%:-nan%) 5370329 + 0 paired in sequencing 2784574 + 0 read1 2585755 + 0 read2 4238766 + 0 properly paired (78.93%:-nan%) 4880900 + 0 with itself and mate mapped 489429 + 0 singletons (9.11%:-nan%) 490584 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)