Left reads: Input : 21801392 Mapped : 20349695 (93.3% of input) of these: 1900569 ( 9.3%) have multiple alignments (29135 have >20) Right reads: Input : 21801392 Mapped : 18743729 (86.0% of input) of these: 1742931 ( 9.3%) have multiple alignments (29123 have >20) 89.7% overall read mapping rate. Aligned pairs: 18135226 of these: 1688877 ( 9.3%) have multiple alignments 61644 ( 0.3%) are discordant alignments 82.9% concordant pair alignment rate.