FastQCFastQC Report
Mon 24 Jun 2019
SRR7518411_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7518411_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31184267
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAAAT585050.18761063070682407No Hit
ATTTTTTATTAATTGCAGCACAGAGACAAGAAGTCAAATGTTTAAAGAAA568680.18236118873661517No Hit
CTCATCAATAAATGGAGACGTATAGGAAAAGTCAGACTACGTCTACAAAA530090.16998635882639151No Hit
GTGCAAGGGTAATCATTTATTGAACAGGAAGAGGAAGAAATTCATGAAAA397300.12740398868442218No Hit
CCATTTTTTATTAATTGCAGCACAGAGACAAGAAGTCAAATGTTTAAAGA335230.10749972093299484No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)