FastQCFastQC Report
Mon 24 Jun 2019
SRR7518417_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7518417_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19616054
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTAC406320.20713646077850315No Hit
CAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAAAT368440.1878257472170499No Hit
CACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCTACCAAA366170.18666853180563228No Hit
CACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCCT336870.17173178662742264No Hit
CCACGATCACAAGAAAGACGTGGTCCTGACAGACAGACAATCCTATTCCC332060.16927971344287693No Hit
CCCCACTAGCCTCTGGCAAAATGAAGTGGGTAACCTTTCTCCTCCTCCTC207910.10598971638230603No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)