Left reads: Input : 31184267 Mapped : 24441996 (78.4% of input) of these: 2926363 (12.0%) have multiple alignments (46724 have >20) Right reads: Input : 31184267 Mapped : 20812304 (66.7% of input) of these: 2491151 (12.0%) have multiple alignments (46733 have >20) 72.6% overall read mapping rate. Aligned pairs: 20262030 of these: 2430124 (12.0%) have multiple alignments 101728 ( 0.5%) are discordant alignments 64.6% concordant pair alignment rate.